Regulon of AgaR in Clostridium perfringens ATCC 13124
| Regulator type: | Transcription factor |
| TF locus tag: | CPF_2963 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | N-acetylgalactosamine utilization |
| Effector: | |
| Regulog: | AgaR - Clostridia-1 |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-1
- By TF family - GntR/Others
- By pathway - N-acetylgalactosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -83
Score: 5 Sequence: TAACTTGTAATAACATCATT
Position: -38
Score: 5.5 Sequence: CAACTGGTAATGACAACATT
Locus tag: CPF_2961
Name: agaS Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Locus tag: CPF_2962
Name: agaY Funciton: Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) |
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agaS
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Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
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agaY
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Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)
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Position: -40
Score: 5.8 Sequence: CAAGTGGTAATTACAACTAT
Locus tag: CPF_2149
Name: agaK2 Funciton: Predicted N-acetylgalactosamine kinase (EC 2.7.1.157) |
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agaK2
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Predicted N-acetylgalactosamine kinase (EC 2.7.1.157)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |