Profile of regulator AgaR in Clostridia-1

Properties
Regulator family:	GntR/Others
Regulation mode:
Biological process:	N-acetylgalactosamine utilization
Effector:
Regulog:	AgaR - Clostridia-1

Member of regulog collections

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Clostridium beijerincki NCIMB 8052
	Cbei_4564	agaA	-58	5.1	AAACTGATAATGTCCACTTA
	Cbei_4564	agaA	-156	5.9	CAAGTGGTAATTACCACTAA
	Cbei_4563	agaR	-171	5.9	TTAGTGGTAATTACCACTTG
	Cbei_4563	agaR	-269	5.1	TAAGTGGACATTATCAGTTT
	Cbei_4539	Cbei_4539	-192	4.8	AAACTGGTAGTATCCAGTTA
Clostridium butyricum 5521
	CBY_3473	CBY_3473	-19	4.7	AAATTGGTTAATACCAAAAA
	CBY_3472	agaA	-285	4.7	TTTTTGGTATTAACCAATTT
	CBY_3028	agaR	-201	5.8	TATTTGGTAATTACCACTTA
	CBY_3029	agaA2	-51	6	TAAGTGGTAATTACCAGTTG
	CBY_3029	agaA2	-267	5.8	TAAGTGGTAATTACCAAATA
Clostridium novyi NT
	NT01CX_0292	agaS	-53	5.1	TAACTGGTAATGACAACACA
	NT01CX_0293	agaR	-41	4.8	TAAGTGGTATGTACAACATG
	NT01CX_0299	NT01CX_0299	-235	5.3	GAACTGGTAATGACAACATT
	NT01CX_0299	NT01CX_0299	-317	5.8	AATGTGGTAATAACAACATT
	NT01CX_0302	agaR	-350	4.1	CAACTTGTTCGTACAAGTTG
	NT01CX_0301	Cbei_1383	-76	4.1	CAACTTGTACGAACAAGTTG
Clostridium perfringens ATCC 13124
	CPF_2961	agaS	-38	5.5	CAACTGGTAATGACAACATT
	CPF_2961	agaS	-83	5	TAACTTGTAATAACATCATT
	CPF_2149	agaK2	-40	5.8	CAAGTGGTAATTACAACTAT

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --