Profile of regulator AgaR in Clostridia-1
Properties
| Regulator family: |
GntR/Others |
| Regulation mode: |
|
| Biological process: |
N-acetylgalactosamine utilization |
| Effector: |
|
| Regulog: |
AgaR - Clostridia-1 |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Clostridium beijerincki NCIMB 8052
|
|
Cbei_4564 |
agaA |
-58 |
5.1 |
AAACTGATAATGTCCACTTA |
|
Cbei_4564 |
agaA |
-156 |
5.9 |
CAAGTGGTAATTACCACTAA |
|
Cbei_4563 |
agaR |
-171 |
5.9 |
TTAGTGGTAATTACCACTTG |
|
Cbei_4563 |
agaR |
-269 |
5.1 |
TAAGTGGACATTATCAGTTT |
|
Cbei_4539 |
Cbei_4539 |
-192 |
4.8 |
AAACTGGTAGTATCCAGTTA |
|
Clostridium butyricum 5521
|
|
CBY_3473 |
CBY_3473 |
-19 |
4.7 |
AAATTGGTTAATACCAAAAA |
|
CBY_3472 |
agaA |
-285 |
4.7 |
TTTTTGGTATTAACCAATTT |
|
CBY_3028 |
agaR |
-201 |
5.8 |
TATTTGGTAATTACCACTTA |
|
CBY_3029 |
agaA2 |
-51 |
6 |
TAAGTGGTAATTACCAGTTG |
|
CBY_3029 |
agaA2 |
-267 |
5.8 |
TAAGTGGTAATTACCAAATA |
|
Clostridium novyi NT
|
|
NT01CX_0292 |
agaS |
-53 |
5.1 |
TAACTGGTAATGACAACACA |
|
NT01CX_0293 |
agaR |
-41 |
4.8 |
TAAGTGGTATGTACAACATG |
|
NT01CX_0299 |
NT01CX_0299 |
-235 |
5.3 |
GAACTGGTAATGACAACATT |
|
NT01CX_0299 |
NT01CX_0299 |
-317 |
5.8 |
AATGTGGTAATAACAACATT |
|
NT01CX_0302 |
agaR |
-350 |
4.1 |
CAACTTGTTCGTACAAGTTG |
|
NT01CX_0301 |
Cbei_1383 |
-76 |
4.1 |
CAACTTGTACGAACAAGTTG |
|
Clostridium perfringens ATCC 13124
|
|
CPF_2961 |
agaS |
-38 |
5.5 |
CAACTGGTAATGACAACATT |
|
CPF_2961 |
agaS |
-83 |
5 |
TAACTTGTAATAACATCATT |
|
CPF_2149 |
agaK2 |
-40 |
5.8 |
CAAGTGGTAATTACAACTAT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
