Regulon of AgaR in Clostridium novyi NT

Properties
Regulator type:	Transcription factor
TF locus tag:	NT01CX_0293, NT01CX_0302
Regulator family:	GntR/Others
Regulation mode:
Biological process:	N-acetylgalactosamine utilization
Effector:
Regulog:	AgaR - Clostridia-1
Statistics of regulated genes:
- Genes	12
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 19 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-1
By TF family - GntR/Others
By pathway - N-acetylgalactosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -350 Score: 4.1 Sequence: CAACTTGTTCGTACAAGTTG Locus tag: NT01CX_0302 Name: agaR Funciton: Transcriptional regulator of N-Acetylgalactosamine utilization, GntR family
	NT01CX_0302	agaR	Transcriptional regulator of N-Acetylgalactosamine utilization, GntR family
Position: -76 Score: 4.1 Sequence: CAACTTGTACGAACAAGTTG Locus tag: NT01CX_0301 Name: Cbei_1383 Funciton: Predicted N-acetylgalactosamine permease Locus tag: NT01CX_0300 Name: NT01CX_0300 Funciton: N-acetylglucosamine-6-sulfatase
	NT01CX_0301	Cbei_1383	Predicted N-acetylgalactosamine permease
	NT01CX_0300	NT01CX_0300	N-acetylglucosamine-6-sulfatase
Position: -41 Score: 4.8 Sequence: TAAGTGGTATGTACAACATG Locus tag: NT01CX_0293 Name: agaR Funciton: Transcriptional regulator of N-Acetylgalactosamine utilization, GntR family
	NT01CX_0293	agaR	Transcriptional regulator of N-Acetylgalactosamine utilization, GntR family
Position: -53 Score: 5.1 Sequence: TAACTGGTAATGACAACACA Locus tag: NT01CX_0292 Name: agaS Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-) Locus tag: NT01CX_0291 Name: agaA Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25) Locus tag: NT01CX_0290 Name: agaY Funciton: Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) Locus tag: NT01CX_0289 Name: agaZ Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56)
	NT01CX_0292	agaS	Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
	NT01CX_0291	agaA	N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
	NT01CX_0290	agaY	Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)
	NT01CX_0289	agaZ	Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56)
Position: -317 Score: 5.8 Sequence: AATGTGGTAATAACAACATT Position: -235 Score: 5.3 Sequence: GAACTGGTAATGACAACATT Locus tag: NT01CX_0299 Name: NT01CX_0299 Funciton: Predicted N-acetylgalactosamine permease Locus tag: NT01CX_0298 Name: null Funciton: conserved hypothetical protein Locus tag: NT01CX_0297 Name: NT01CX_0297 Funciton: N-acetylgalactosamine 6-sulfate sulfatase Locus tag: NT01CX_0296 Name: agaK2 Funciton: Predicted N-acetylgalactosamine kinase (EC 2.7.1.157)
	NT01CX_0299	NT01CX_0299	Predicted N-acetylgalactosamine permease
	NT01CX_0298		conserved hypothetical protein
	NT01CX_0297	NT01CX_0297	N-acetylgalactosamine 6-sulfate sulfatase
	NT01CX_0296	agaK2	Predicted N-acetylgalactosamine kinase (EC 2.7.1.157)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD