Regulon of GulR in Ralstonia solanacearum GMI1000
| Regulator type: | Transcription factor |
| TF locus tag: | RS05372 |
| Regulator family: | LysR |
| Regulation mode: | |
| Biological process: | Glucuronate utilization; Galacturonate utilization; Galactarate utilization; Glucarate utilization |
| Effector: | |
| Regulog: | GulR - Ralstonia |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - GulR
- By TF family - LysR
- By pathway - Glucuronate utilization
- By pathway - Galacturonate utilization
- By pathway - Galactarate utilization
- By pathway - Glucarate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -109
Score: 6.4 Sequence: ATCGATTCAAAAAATGAATTGAT
Locus tag: RS05369
Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: RS05368
Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Locus tag: RSp0828
Name: gudP Funciton: D-glucarate permease / D-galactarate permease
Locus tag: RSp0829
Name: gudD2 Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: RSp0830
Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42)
Locus tag: RS05364
Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: RS05363
Name: uxuL Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: RSp0833
Name: pgl Funciton: Polygalacturonase (EC 3.2.1.15)
Locus tag: RSp0834
Name: exuT2 Funciton: Hexuronate transporter |
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kdgD
|
5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
|
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kgsD
|
Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
|
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gudP
|
D-glucarate permease / D-galactarate permease
|
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gudD2
|
Glucarate dehydratase (EC 4.2.1.40)
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garD
|
D-galactarate dehydratase (EC 4.2.1.42)
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udh
|
Uronate dehydrogenase (EC 1.1.1.203)
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uxuL
|
Predicted glucuronolactone/galactarolactone lactonase
|
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pgl
|
Polygalacturonase (EC 3.2.1.15)
|
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exuT2
|
Hexuronate transporter
|
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Position: -111
Score: 6.1 Sequence: ATCGATTCAAAACGTATATCGAT
Locus tag: RS05371
Name: uxuL2 Funciton: Predicted glucuronolactone/galactarolactone lactonase |
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uxuL2
|
Predicted glucuronolactone/galactarolactone lactonase
|
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |