Regulon of GguR in Pseudomonas syringae pv. tomato str. DC3000

Properties
Regulator type:	Transcription factor
TF locus tag:	PSPTO3283
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glucuronate utilization; Glucarate utilization; Galacturonate utilization; Galactarate utilization
Effector:
Regulog:	GguR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	12
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 25 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By trascription factor - GguR
By TF family - GntR/Others
By pathway - Glucuronate utilization
By pathway - Glucarate utilization
By pathway - Galacturonate utilization
By pathway - Galactarate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -163 Score: 5.1 Sequence: AAGTTGTACGATGACTG Locus tag: PSPTO3323 Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
	PSPTO3323	kgsD	Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Position: -77 Score: 5.1 Sequence: CAGTTGTACGATGACTT Locus tag: PSPTO4549 Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) Locus tag: PSPTO4548 Name: garP Funciton: D-galactarate permease Locus tag: PSPTO4547 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42)
	PSPTO4549	kdgD	5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
	PSPTO4548	garP	D-galactarate permease
	PSPTO4547	garD	D-galactarate dehydratase (EC 4.2.1.42)
Position: -385 Score: 4.2 Sequence: CAGTCATCGTATAACGA Position: -265 Score: 5.6 Sequence: ATGTTGTACGACAACAT Locus tag: PSPTO5219 Name: exuT Funciton: Hexuronate transporter
	PSPTO5219	exuT	Hexuronate transporter
Position: -48 Score: 5.1 Sequence: AAGTCATACGACAACAG Locus tag: PSPTO1053 Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203) Locus tag: PSPTO1052 Name: uxuL Funciton: Predicted glucuronolactone/galactarolactone lactonase Locus tag: PSPTO1051 Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component Locus tag: PSPTO1050 Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component Locus tag: PSPTO1049 Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component Locus tag: PSPTO1048 Name: PF00892 Funciton: Drug/metabolite transporter Locus tag: PSPTO1047 Name: aldE Funciton: Aldose 1-epimerase (EC 5.1.3.3)
	PSPTO1053	udh	Uronate dehydrogenase (EC 1.1.1.203)
	PSPTO1052	uxuL	Predicted glucuronolactone/galactarolactone lactonase
	PSPTO1051	uxuP	Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
	PSPTO1050	uxuQ	Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
	PSPTO1049	uxuM	Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
	PSPTO1048	PF00892	Drug/metabolite transporter
	PSPTO1047	aldE	Aldose 1-epimerase (EC 5.1.3.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD