Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of GguR in Pseudomonas putida KT2440

Properties
Regulator type: Transcription factor
TF locus tag: PP3603, PP4759
Regulator family: GntR/Others
Regulation mode:
Biological process: Glucuronate utilization; Glucarate utilization; Galacturonate utilization; Galactarate utilization
Effector:
Regulog: GguR - Pseudomonadaceae
Statistics of regulated genes:
- Genes 15
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 25 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -43
Score: 5.1
Sequence: AAGTCATACGACAACCT
Locus tag: PP1171
Name: udh
Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: PP1170
Name: uxuL
Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: PP1169
Name: uxuP
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: PP_1168
Name: uxuQ
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: PP1167
Name: uxuM
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
Locus tag: PP1166
Name: PF00892
Funciton: Drug/metabolite transporter
Locus tag: PP1165
Name: aldE
Funciton: Aldose 1-epimerase (EC 5.1.3.3)
PP1171
udh
Uronate dehydrogenase (EC 1.1.1.203)
PP1170
uxuL
Predicted glucuronolactone/galactarolactone lactonase
PP1169
uxuP
Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
PP_1168
uxuQ
Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
PP1167
uxuM
Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
PP1166
PF00892
Drug/metabolite transporter
PP1165
aldE
Aldose 1-epimerase (EC 5.1.3.3)
Position: -71
Score: 5.3
Sequence: AGGTTGTACGATAACTT
Locus tag: PP3599
Name: kdgD
Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: PP3600
Name: garP
Funciton: D-galactarate permease
Locus tag: PP3601
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
Locus tag: PP3602
Name: kgsD
Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
PP3599
kdgD
5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
PP3600
garP
D-galactarate permease
PP3601
garD
D-galactarate dehydratase (EC 4.2.1.42)
PP3602
kgsD
Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Position: -79
Score: 5.1
Sequence: ATCTTGTCGTACAACTT
Locus tag: PP4758
Name: gguT
Funciton: Predicted hexarate transporter
Locus tag: PP4757
Name: gudD
Funciton: Glucarate dehydratase (EC 4.2.1.40)
PP4758
gguT
Predicted hexarate transporter
PP4757
gudD
Glucarate dehydratase (EC 4.2.1.40)
Position: -47
Score: 4.6
Sequence: ATGTGATCGTACAACCG
Locus tag: PP3603
Name: gguR
Funciton: Predicted D-glucarate or D-galactorate utilization regulator, GntR family
PP3603
gguR
Predicted D-glucarate or D-galactorate utilization regulator, GntR family
Position: -104
Score: 5.1
Sequence: AAGTTGTACGACAAGAT
Locus tag: PP4759
Name: gguR
Funciton: Predicted D-glucarate or D-galactorate utilization regulator, GntR family
PP4759
gguR
Predicted D-glucarate or D-galactorate utilization regulator, GntR family
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