Regulon of PaaR in Streptomyces avermitilis MA-4680
| Regulator type: | Transcription factor |
| TF locus tag: | SAV_4360 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Phenylacetic acid degradation |
| Effector: | Phenylacetyl-CoA |
| Regulog: | PaaR - Streptomycetaceae |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptomycetaceae
- By trascription factor - PaaR
- By TF family - TetR
- By effector - Phenylacetyl-CoA
- By pathway - Phenylacetic acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -56
Score: 5 Sequence: GGCTACCGAATGATCGGTCGCC
Locus tag: SAV_1257
Name: paaK Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30) |
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paaK
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Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
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Position: -48
Score: 5.8 Sequence: ACCGAACGATCGGTCGGTCGGT
Locus tag: SAV_4354
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: SAV_4353
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: SAV_4352
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: SAV_4351
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: SAV_4350
Name: paaE Funciton: Phenylacetate-CoA oxygenase, PaaE subunit |
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paaA
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Phenylacetate-CoA oxygenase, PaaA subunit
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paaB
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Phenylacetate-CoA oxygenase, PaaB subunit
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paaC
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Phenylacetate-CoA oxygenase, PaaC subunit
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paaD
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Phenylacetate-CoA oxygenase, PaaD subunit
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paaE
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Phenylacetate-CoA oxygenase, PaaE subunit
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Position: -96
Score: 5.8 Sequence: CCCGACCGATCGTTCGGTTACT
Locus tag: SAV_4358
Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ |
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paaZ
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Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
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Position: -77
Score: 5.6 Sequence: GACGACCGAACAATCGGTAGGT
Locus tag: SAV_4362
Name: bkdA Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: SAV_4363
Name: bkdB Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: SAV_4364
Name: bkdC Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA
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Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
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bkdB
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Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
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bkdC
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Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
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Position: -74
Score: 5.8 Sequence: AGTAACCGAACGATCGGTCGGG
Locus tag: SAV_4359
Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: SAV_4360
Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family |
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paaH
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3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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paaR
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Transcriptional regulator of phenylacetic acid degradation, TetR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |