Regulon of Zur in Actinosynnema mirum DSM 43827

Properties
Regulator type:	Transcription factor
TF locus tag:	Amir_1261, Amir_4413
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Zinc homeostasis
Effector:	Zinc ion, (Zn2+)
Regulog:	Zur - Frankineae/Propionibacterineae/Pseudonocardiaceae
Statistics of regulated genes:
- Genes	18
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 24 sites [see more]

Member of regulog collections

By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
By trascription factor - Zur
By TF family - FUR
By effector - Zinc ion, (Zn2+)
By pathway - Zinc homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -55 Score: 5.5 Sequence: ATTGAAAACGATTGTCTTT Locus tag: Amir_4413 Name: zur Funciton: Zinc homeostasis transcriptional regulator Zur, Fur family
	Amir_4413	zur	Zinc homeostasis transcriptional regulator Zur, Fur family
Position: -65 Score: 5.7 Sequence: GTTGAAAACCGTTGTCATT Locus tag: Amir_3101 Name: Amir_3101 Funciton: Surface-anchored repeat, actinobacteria Locus tag: Amir_3100 Name: Amir_3100 Funciton: Surface-anchored repeat, actinobacteria
	Amir_3101	Amir_3101	Surface-anchored repeat, actinobacteria
	Amir_3100	Amir_3100	Surface-anchored repeat, actinobacteria
Position: -49 Score: 5.2 Sequence: CTCGACAACGGTTACCATT Locus tag: Amir_0352 Name: znuA Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA Locus tag: Amir_0353 Name: znuC Funciton: Zinc ABC transporter, ATP-binding protein ZnuC Locus tag: Amir_0354 Name: znuB Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB
	Amir_0352	znuA	Zinc ABC transporter, periplasmic-binding protein ZnuA
	Amir_0353	znuC	Zinc ABC transporter, ATP-binding protein ZnuC
	Amir_0354	znuB	Zinc ABC transporter, inner membrane permease protein ZnuB
Position: -39 Score: 5.3 Sequence: GGTGAAAATGATTGTCATT Locus tag: Amir_0607 Name: rpmB2 Funciton: LSU ribosomal protein L28p Locus tag: Amir_0606 Name: rpmG2 Funciton: LSU ribosomal protein L33p Locus tag: Amir_0605 Name: rpsN2 Funciton: SSU ribosomal protein S14p Locus tag: Amir_0604 Name: rpsR2 Funciton: SSU ribosomal protein S18p
	Amir_0607	rpmB2	LSU ribosomal protein L28p
	Amir_0606	rpmG2	LSU ribosomal protein L33p
	Amir_0605	rpsN2	SSU ribosomal protein S14p
	Amir_0604	rpsR2	SSU ribosomal protein S18p
Position: -78 Score: 5.9 Sequence: ATTGAAAACGGTTGTCGTT Locus tag: Amir_4768 Name: znuA3 Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA Locus tag: Amir_4769 Name: null Funciton: hypothetical protein Locus tag: Amir_4770 Name: znuC3 Funciton: Zinc ABC transporter, ATP-binding protein ZnuC Locus tag: Amir_4771 Name: znuB3 Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB
	Amir_4768	znuA3	Zinc ABC transporter, periplasmic-binding protein ZnuA
	Amir_4769		hypothetical protein
	Amir_4770	znuC3	Zinc ABC transporter, ATP-binding protein ZnuC
	Amir_4771	znuB3	Zinc ABC transporter, inner membrane permease protein ZnuB
Position: -60 Score: 5.5 Sequence: ATTGAAAATGATTGTCCTT Locus tag: Amir_4776 Name: TIGR03773 Funciton: Conserved hypothetical protein CHP03773, ABC transporter-like
	Amir_4776	TIGR03773	Conserved hypothetical protein CHP03773, ABC transporter-like
Position: -52 Score: 5.5 Sequence: AATGACAATCGTTTCCGTT Locus tag: Amir_4416 Name: yciC Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family Locus tag: Amir_4415 Name: rpmE2 Funciton: LSU ribosomal protein L31p Locus tag: Amir_4414 Name: rpmF2 Funciton: LSU ribosomal protein L32p
	Amir_4416	yciC	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
	Amir_4415	rpmE2	LSU ribosomal protein L31p
	Amir_4414	rpmF2	LSU ribosomal protein L32p

Export
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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Zur in Actinosynnema mirum DSM 43827

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --