Regulon of BioQ in Rhodococcus sp. RHA1

Properties
Regulator type:	Transcription factor
TF locus tag:	RHA1_ro01044
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Biotin biosynthesis
Effector:	Biotin
Regulog:	BioQ - Nocardiaceae
Statistics of regulated genes:
- Genes	11
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 25 sites [see more]

Member of regulog collections

By trascription factor - BioQ
By taxonomy - Nocardiaceae
By TF family - TetR
By effector - Biotin
By pathway - Biotin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -24 Score: 5.5 Sequence: ATTGAACACCGTACAAG Position: -8 Score: 5.8 Sequence: GTTGAACGGTGTTCACG Locus tag: RHA1_ro01044 Name: bioQ Funciton: Biotin repressor, TetR family
	RHA1_ro01044	bioQ	Biotin repressor, TetR family
Position: -59 Score: 6.1 Sequence: CTTGAACGGTGTTCAAC Locus tag: RHA1_ro01055 Name: bioA Funciton: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
	RHA1_ro01055	bioA	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
Position: -38 Score: 5.7 Sequence: CTTGAACGTCGTTCAAG Locus tag: RHA1_ro05255 Name: bioY Funciton: Substrate-specific component BioY of biotin ECF transporter Locus tag: RHA1_ro05256 Name: yhfT Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Locus tag: RHA1_ro05257 Name: yhfS Funciton: acetyl-CoA acetyltransferase Locus tag: RHA1_ro05258 Name: bioM Funciton: ATPase component BioM of energizing module of biotin ECF transporter Locus tag: RHA1_ro05259 Name: bioN Funciton: Transmembrane component BioN of energizing module of biotin ECF transporter Locus tag: RHA1_ro05260 Name: yhfT Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	RHA1_ro05255	bioY	Substrate-specific component BioY of biotin ECF transporter
	RHA1_ro05256	yhfT	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	RHA1_ro05257	yhfS	acetyl-CoA acetyltransferase
	RHA1_ro05258	bioM	ATPase component BioM of energizing module of biotin ECF transporter
	RHA1_ro05259	bioN	Transmembrane component BioN of energizing module of biotin ECF transporter
	RHA1_ro05260	yhfT	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -1 Score: 5.9 Sequence: CGTGAACACCGTTCAAC Position: 15 Score: 5.1 Sequence: CTTGTACGGTGTTCAAT Locus tag: RHA1_ro01043 Name: bioB Funciton: Biotin synthase (EC 2.8.1.6)
	RHA1_ro01043	bioB	Biotin synthase (EC 2.8.1.6)
Position: -26 Score: 6.1 Sequence: GTTGAACACCGTTCAAG Locus tag: RHA1_ro01054 Name: bioF Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Locus tag: RHA1_ro01053 Name: bioD Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
	RHA1_ro01054	bioF	8-amino-7-oxononanoate synthase (EC 2.3.1.47)
	RHA1_ro01053	bioD	Dethiobiotin synthetase (EC 6.3.3.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD