Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fur in Listeria seeligeri serovar 1/2b str. SLCC3954

Properties
Regulator type: Transcription factor
TF locus tag: lse_1943
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Listeriaceae
Statistics of regulated genes:
- Genes 24
- Operons 13
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 91 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -41
Score: 5.2
Sequence: AACGATAATGAAAATCATT
Position: -35
Score: 6.1
Sequence: AATGAAAATCATTTTCAAT
Locus tag: lse_0455
Name: fepB
Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
fepB
Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)

Position: -59
Score: 5.8
Sequence: ATTGATAATTATTATCACC
Locus tag: lse_1945
Name: fhuB
Funciton: Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
Locus tag: lse_1944
Name: fhuG
Funciton: Ferrichrome transport system permease protein FhuG
fhuB
Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
fhuG
Ferrichrome transport system permease protein FhuG

Position: -84
Score: 5.4
Sequence: ATTGACAATGAGAATCATT
Position: -78
Score: 6.3
Sequence: AATGAGAATCATTATCAAT
Locus tag: lse_0393
Name: isdG
Funciton: Heme-degrading cytoplasmic oxygenase IsdG
isdG
Heme-degrading cytoplasmic oxygenase IsdG

Position: -127
Score: 5.6
Sequence: GTTGACAATGATAATCATT
Position: -121
Score: 6.5
Sequence: AATGATAATCATTATCAAT
Locus tag: lse_2166
Name: isdC
Funciton: Haem uptake protein IsdC
Locus tag: lse_2165
Name: isdA
Funciton: Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC
Locus tag: lse_2164
Name: isdE
Funciton: Heme ABC transporter, haem-binding protein IsdE
Locus tag: lse_2163
Name: isdF
Funciton: Heme ABC transporter, permease component IsdF
Locus tag: lse_2162
Name: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
Funciton: Heme transporter analogous to IsdDEF, ATP-binding protein
Locus tag: lse_2161
Name: srtB
Funciton: Sortase, SrtB family
isdC
Haem uptake protein IsdC
isdA
Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC
isdE
Heme ABC transporter, haem-binding protein IsdE
isdF
Heme ABC transporter, permease component IsdF
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
Heme transporter analogous to IsdDEF, ATP-binding protein
srtB
Sortase, SrtB family

Position: -34
Score: 5.5
Sequence: AGTGATAATCATTATAAAC
Locus tag: lse_0840
Name: dps
Funciton: Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)
dps
Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)

Position: -92
Score: 5.1
Sequence: ATTTATAATTATTATAAAC
Position: -59
Score: 5.6
Sequence: AATGATAATGATGATAATT
Locus tag: lse_1943
Name: fur
Funciton: Transcriptional regulator for iron transport and metabolism, Fur family
fur
Transcriptional regulator for iron transport and metabolism, Fur family

Position: -66
Score: 5.9
Sequence: AATGAAAATCATTCTCATA
Locus tag: lse_2240
Name: lmo2261
Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly
Locus tag: lse_2239
Name: lmo2260
Funciton: Acetyltransferase, GNAT family
lmo2261
PaaD-like protein (DUF59) involved in Fe-S cluster assembly
lmo2260
Acetyltransferase, GNAT family

Position: -91
Score: 5.6
Sequence: GATGAAAATAATTCTCAAT
Locus tag: lse_2331
Name: fepB2
Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
Locus tag: lse_2330
Name: fepD2
Funciton: Ferrichrome transport system permease protein (TC 3.A.1.14.3)
Locus tag: lse_2329
Name: fepC2
Funciton: Ferrichrome transport ATP-binding protein (TC 3.A.1.14.3)
fepB2
Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
fepD2
Ferrichrome transport system permease protein (TC 3.A.1.14.3)
fepC2
Ferrichrome transport ATP-binding protein (TC 3.A.1.14.3)

Position: -55
Score: 5.9
Sequence: GTTGATAATGATTATCATA
Position: -49
Score: 5.7
Sequence: AATGATTATCATATTCATT
Locus tag: lse_2094
Name: feoA
Funciton: Ferrous iron transport protein A
Locus tag: lse_2095
Name: feoB
Funciton: Ferrous iron transport protein B
feoA
Ferrous iron transport protein A
feoB
Ferrous iron transport protein B

Position: -46
Score: 4.4
Sequence: AATAGGAATGATTATAAAA
Locus tag: lse_0729
Name: porA
Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
porA
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)

Position: -146
Score: 5.8
Sequence: ATTGATAATGTTTCTCATT
Position: -43
Score: 6
Sequence: ATTGAGAATGATTATCAAC
Locus tag: lse_1947
Name: fhuC
Funciton: Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
Locus tag: lse_1948
Name: PF07992
Funciton: Thioredoxin reductase (EC 1.8.1.9)
fhuC
Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
PF07992
Thioredoxin reductase (EC 1.8.1.9)

Position: -138
Score: 6
Sequence: GTTGATAATCATTCTCAAT
Position: -35
Score: 5.8
Sequence: AATGAGAAACATTATCAAT
Locus tag: lse_1946
Name: fhuA
Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
fhuA
Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)

Position: -54
Score: 5
Sequence: TTTAATAATTATTATAAAT
Locus tag: lse_2685
Name: katG
Funciton: Catalase (EC 1.11.1.6)
katG
Catalase (EC 1.11.1.6)
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