Regulon of Fur in Listeria seeligeri serovar 1/2b str. SLCC3954
| Regulator type: | Transcription factor |
| TF locus tag: | lse_1943 |
| Regulator family: | FUR |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Regulog: | Fur - Listeriaceae |
| Statistics of regulated genes: | |
| - Genes | 24 |
| - Operons | 13 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Listeriaceae
- By trascription factor - FUR
- By TF family - FUR
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -41
Score: 5.2 Sequence: AACGATAATGAAAATCATT
Position: -35
Score: 6.1 Sequence: AATGAAAATCATTTTCAAT
Locus tag: lse_0455
Name: fepB Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3) |
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fepB
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Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
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Position: -59
Score: 5.8 Sequence: ATTGATAATTATTATCACC
Locus tag: lse_1945
Name: fhuB Funciton: Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
Locus tag: lse_1944
Name: fhuG Funciton: Ferrichrome transport system permease protein FhuG |
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fhuB
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Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
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fhuG
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Ferrichrome transport system permease protein FhuG
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Position: -84
Score: 5.4 Sequence: ATTGACAATGAGAATCATT
Position: -78
Score: 6.3 Sequence: AATGAGAATCATTATCAAT
Locus tag: lse_0393
Name: isdG Funciton: Heme-degrading cytoplasmic oxygenase IsdG |
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isdG
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Heme-degrading cytoplasmic oxygenase IsdG
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Position: -127
Score: 5.6 Sequence: GTTGACAATGATAATCATT
Position: -121
Score: 6.5 Sequence: AATGATAATCATTATCAAT
Locus tag: lse_2166
Name: isdC Funciton: Haem uptake protein IsdC
Locus tag: lse_2165
Name: isdA Funciton: Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC
Locus tag: lse_2164
Name: isdE Funciton: Heme ABC transporter, haem-binding protein IsdE
Locus tag: lse_2163
Name: isdF Funciton: Heme ABC transporter, permease component IsdF
Locus tag: lse_2162
Name: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Funciton: Heme transporter analogous to IsdDEF, ATP-binding protein
Locus tag: lse_2161
Name: srtB Funciton: Sortase, SrtB family |
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isdC
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Haem uptake protein IsdC
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isdA
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Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC
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isdE
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Heme ABC transporter, haem-binding protein IsdE
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isdF
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Heme ABC transporter, permease component IsdF
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ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
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Heme transporter analogous to IsdDEF, ATP-binding protein
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srtB
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Sortase, SrtB family
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Position: -34
Score: 5.5 Sequence: AGTGATAATCATTATAAAC
Locus tag: lse_0840
Name: dps Funciton: Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) |
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dps
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Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)
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Position: -92
Score: 5.1 Sequence: ATTTATAATTATTATAAAC
Position: -59
Score: 5.6 Sequence: AATGATAATGATGATAATT
Locus tag: lse_1943
Name: fur Funciton: Transcriptional regulator for iron transport and metabolism, Fur family |
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fur
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Transcriptional regulator for iron transport and metabolism, Fur family
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Position: -66
Score: 5.9 Sequence: AATGAAAATCATTCTCATA
Locus tag: lse_2240
Name: lmo2261 Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly
Locus tag: lse_2239
Name: lmo2260 Funciton: Acetyltransferase, GNAT family |
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lmo2261
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PaaD-like protein (DUF59) involved in Fe-S cluster assembly
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lmo2260
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Acetyltransferase, GNAT family
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Position: -91
Score: 5.6 Sequence: GATGAAAATAATTCTCAAT
Locus tag: lse_2331
Name: fepB2 Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
Locus tag: lse_2330
Name: fepD2 Funciton: Ferrichrome transport system permease protein (TC 3.A.1.14.3)
Locus tag: lse_2329
Name: fepC2 Funciton: Ferrichrome transport ATP-binding protein (TC 3.A.1.14.3) |
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fepB2
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Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
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fepD2
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Ferrichrome transport system permease protein (TC 3.A.1.14.3)
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fepC2
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Ferrichrome transport ATP-binding protein (TC 3.A.1.14.3)
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Position: -55
Score: 5.9 Sequence: GTTGATAATGATTATCATA
Position: -49
Score: 5.7 Sequence: AATGATTATCATATTCATT
Locus tag: lse_2094
Name: feoA Funciton: Ferrous iron transport protein A
Locus tag: lse_2095
Name: feoB Funciton: Ferrous iron transport protein B |
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feoA
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Ferrous iron transport protein A
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feoB
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Ferrous iron transport protein B
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Position: -46
Score: 4.4 Sequence: AATAGGAATGATTATAAAA
Locus tag: lse_0729
Name: porA Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
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porA
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Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
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Position: -146
Score: 5.8 Sequence: ATTGATAATGTTTCTCATT
Position: -43
Score: 6 Sequence: ATTGAGAATGATTATCAAC
Locus tag: lse_1947
Name: fhuC Funciton: Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
Locus tag: lse_1948
Name: PF07992 Funciton: Thioredoxin reductase (EC 1.8.1.9) |
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fhuC
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Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
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PF07992
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Thioredoxin reductase (EC 1.8.1.9)
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Position: -138
Score: 6 Sequence: GTTGATAATCATTCTCAAT
Position: -35
Score: 5.8 Sequence: AATGAGAAACATTATCAAT
Locus tag: lse_1946
Name: fhuA Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3) |
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fhuA
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Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
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Position: -54
Score: 5 Sequence: TTTAATAATTATTATAAAT
Locus tag: lse_2685
Name: katG Funciton: Catalase (EC 1.11.1.6) |
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katG
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Catalase (EC 1.11.1.6)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |