Regulon of Fur in Listeria monocytogenes EGD-e

Properties
Regulator type:	Transcription factor
TF locus tag:	lmo1956
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Listeriaceae
Statistics of regulated genes:
- Genes	30
- Operons	16
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 91 sites [see more]

Member of regulog collections

By taxonomy - Listeriaceae
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -139 Score: 5.8 Sequence: GGTGATAATCATTCTCAAT Position: -35 Score: 5.6 Sequence: ACTGAGAATTATTATCAGT Locus tag: lmo1959 Name: fhuA Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
	lmo1959	fhuA	Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
Position: -10 Score: 4.8 Sequence: ATTGATAAAAATGATAAAT Locus tag: lmo1476 Name: COG0635 Funciton: Oxygen-independent coproporphyrinogen III oxidase, putative
	lmo1476	COG0635	Oxygen-independent coproporphyrinogen III oxidase, putative
Position: -47 Score: 5.9 Sequence: TATGATAATGATAATCATT Position: -41 Score: 6.3 Sequence: AATGATAATCATTTTCAAT Locus tag: lmo0365 Name: efeU Funciton: Ferrous iron transport permease EfeU Locus tag: lmo0366 Name: efeO Funciton: Ferrous iron transport periplasmic protein EfeO Locus tag: lmo0367 Name: efeB Funciton: Ferrous iron transport peroxidase EfeB
	lmo0365	efeU	Ferrous iron transport permease EfeU
	lmo0366	efeO	Ferrous iron transport periplasmic protein EfeO
	lmo0367	efeB	Ferrous iron transport peroxidase EfeB
Position: -46 Score: 6.2 Sequence: ACTGATAATGATTATCATT Position: -40 Score: 6 Sequence: AATGATTATCATTTTCATT Locus tag: lmo0362 Name: lmo0362 Funciton: Twin-arginine translocation protein TatA Locus tag: lmo0361 Name: lmo0361 Funciton: Twin-arginine translocation protein TatC
	lmo0362	lmo0362	Twin-arginine translocation protein TatA
	lmo0361	lmo0361	Twin-arginine translocation protein TatC
Position: -59 Score: 6 Sequence: ATTGATAATTATTATCACT Locus tag: lmo1958 Name: fhuB Funciton: Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3) Locus tag: lmo1957 Name: fhuG Funciton: Ferrichrome transport system permease protein FhuG
	lmo1958	fhuB	Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
	lmo1957	fhuG	Ferrichrome transport system permease protein FhuG
Position: -129 Score: 5.6 Sequence: GTTGACAATGATAATCATT Position: -123 Score: 6.5 Sequence: AATGATAATCATTATCAAT Locus tag: lmo2186 Name: isdC Funciton: Haem uptake protein IsdC Locus tag: lmo2185 Name: isdA Funciton: Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC Locus tag: lmo2184 Name: isdE Funciton: Heme ABC transporter, haem-binding protein IsdE Locus tag: lmo2183 Name: isdF Funciton: Heme ABC transporter, permease component IsdF Locus tag: lmo2182 Name: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Funciton: Heme transporter analogous to IsdDEF, ATP-binding protein Locus tag: lmo2181 Name: srtB Funciton: Sortase, SrtB family
	lmo2186	isdC	Haem uptake protein IsdC
	lmo2185	isdA	Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC
	lmo2184	isdE	Heme ABC transporter, haem-binding protein IsdE
	lmo2183	isdF	Heme ABC transporter, permease component IsdF
	lmo2182	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components	Heme transporter analogous to IsdDEF, ATP-binding protein
	lmo2181	srtB	Sortase, SrtB family
Position: -42 Score: 5.2 Sequence: AACGATAATGAAAATCATT Position: -36 Score: 6.1 Sequence: AATGAAAATCATTTTCAAT Locus tag: lmo0541 Name: fepB Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
	lmo0541	fepB	Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
Position: -84 Score: 4.9 Sequence: ATTGACATTGAGAATCATT Position: -78 Score: 6.3 Sequence: ATTGAGAATCATTATCAAT Locus tag: lmo0484 Name: isdG Funciton: Heme-degrading cytoplasmic oxygenase IsdG
	lmo0484	isdG	Heme-degrading cytoplasmic oxygenase IsdG
Position: -55 Score: 5 Sequence: TTTAATAATTATTATAAAT Locus tag: lmo2785 Name: katG Funciton: Catalase (EC 1.11.1.6)
	lmo2785	katG	Catalase (EC 1.11.1.6)
Position: -35 Score: 5.5 Sequence: AGTGATAATCATTATAAAA Locus tag: lmo0943 Name: dps Funciton: Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)
	lmo0943	dps	Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)
Position: -93 Score: 5.1 Sequence: ATTTATAATTATTATAAAC Position: -60 Score: 5.6 Sequence: AATGATAATGATGATAATT Locus tag: lmo1956 Name: fur Funciton: Transcriptional regulator for iron transport and metabolism, Fur family
	lmo1956	fur	Transcriptional regulator for iron transport and metabolism, Fur family
Position: -66 Score: 5.9 Sequence: AATGAAAATCATTCTCATA Locus tag: lmo2261 Name: lmo2261 Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly Locus tag: lmo2260 Name: lmo2260 Funciton: Acetyltransferase, GNAT family
	lmo2261	lmo2261	PaaD-like protein (DUF59) involved in Fe-S cluster assembly
	lmo2260	lmo2260	Acetyltransferase, GNAT family
Position: -91 Score: 5.6 Sequence: GATGAAAATAATTCTCAAT Locus tag: lmo2431 Name: fepB2 Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3) Locus tag: lmo2430 Name: fepD2 Funciton: Ferrichrome transport system permease protein (TC 3.A.1.14.3) Locus tag: lmo2429 Name: fepC2 Funciton: Ferrichrome transport ATP-binding protein (TC 3.A.1.14.3)
	lmo2431	fepB2	Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
	lmo2430	fepD2	Ferrichrome transport system permease protein (TC 3.A.1.14.3)
	lmo2429	fepC2	Ferrichrome transport ATP-binding protein (TC 3.A.1.14.3)
Position: -54 Score: 5.7 Sequence: GTTGATAATGATTATCATG Position: -48 Score: 5.6 Sequence: AATGATTATCATGTTCATT Locus tag: lmo2104 Name: feoA Funciton: Ferrous iron transport protein A Locus tag: lmo2105 Name: feoB Funciton: Ferrous iron transport protein B
	lmo2104	feoA	Ferrous iron transport protein A
	lmo2105	feoB	Ferrous iron transport protein B
Position: -46 Score: 5.1 Sequence: AATAAGAATGATTATAAAA Locus tag: lmo0829 Name: porA Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
	lmo0829	porA	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Position: -148 Score: 5.6 Sequence: ACTGATAATAATTCTCAGT Position: -44 Score: 5.8 Sequence: ATTGAGAATGATTATCACC Locus tag: lmo1960 Name: fhuC Funciton: Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3) Locus tag: lmo1961 Name: PF07992 Funciton: Thioredoxin reductase (EC 1.8.1.9)
	lmo1960	fhuC	Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
	lmo1961	PF07992	Thioredoxin reductase (EC 1.8.1.9)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Listeria monocytogenes EGD-e

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --