Regulon of GguR in Delftia acidovorans SPH-1
| Regulator type: | Transcription factor |
| TF locus tag: | Daci_0253 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization |
| Effector: | |
| Regulog: | GguR - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By trascription factor - GguR
- By TF family - GntR/Others
- By pathway - Glucarate utilization
- By pathway - Galactarate utilization
- By pathway - Galacturonate utilization
- By pathway - Glucuronate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -73
Score: 5.6 Sequence: AAGTTGTACGACAACGT
Locus tag: Daci_0254
Name: gudD2 Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: Daci_0255
Name: tctC2 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
Locus tag: Daci_0256
Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42)
Locus tag: Daci_0257
Name: uxuL2 Funciton: Predicted glucuronolactone/galactarolactone lactonase |
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gudD2
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Glucarate dehydratase (EC 4.2.1.40)
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tctC2
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Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
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garD
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D-galactarate dehydratase (EC 4.2.1.42)
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uxuL2
|
Predicted glucuronolactone/galactarolactone lactonase
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Position: -43
Score: 5.3 Sequence: CAGTTGTACGACAACTG
Locus tag: Daci_0252
Name: tctC1 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
Locus tag: Daci_0251
Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: Daci_0250
Name: tctC3 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
Locus tag: Daci_0249
Name: serA Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
Locus tag: Daci_0248
Name: gudD Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: Daci_0247
Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) |
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tctC1
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Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
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kdgD
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5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
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tctC3
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Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
|
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serA
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D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
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gudD
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Glucarate dehydratase (EC 4.2.1.40)
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kgsD
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Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
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Position: -26
Score: 5.6 Sequence: ACGTTGTCGTACAACTT
Locus tag: Daci_0253
Name: gguR Funciton: Predicted D-glucarate or D-galactorate utilization regulator, GntR family |
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gguR
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Predicted D-glucarate or D-galactorate utilization regulator, GntR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |