Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SO3393 in Shewanella sediminis HAW-EB3

Properties
Regulator type: Transcription factor
TF locus tag: Ssed_3643
Regulator family: TetR
Regulation mode: repressor
Biological process: Drug resistance
Effector:
Regulog: SO3393 - Shewanellaceae
Statistics of regulated genes:
- Genes 2
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 78 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -84
Score: 5.5
Sequence: TTTTGAATGTTTGTTCAAAA
Position: -60
Score: 5
Sequence: ACTTGAATGATCGTTCAAAT
Position: -33
Score: 7
Sequence: TCTTGAATGAACATTCAAGA
Locus tag: Ssed_3644
Name: SO3392
Funciton: NADH-dependent flavin oxidoreductase, Oye family
SO3392
NADH-dependent flavin oxidoreductase, Oye family

Position: -128
Score: 7
Sequence: TCTTGAATGTTCATTCAAGA
Position: -101
Score: 5
Sequence: ATTTGAACGATCATTCAAGT
Position: -77
Score: 5.5
Sequence: TTTTGAACAAACATTCAAAA
Locus tag: Ssed_3643
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393
Transcriptional regulator, TetR family
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD