Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator SO3393 in Shewanellaceae

Properties
Regulator family: TetR
Regulation mode: repressor
Biological process: Drug resistance
Effector:
Regulog: SO3393 - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_3392 SO3392 -34 7 TCTTGAACGTACATTCAAGA
SO_3392 SO3392 -85 5.5 TATTGAACAAACATTCAAAA
SO_3392 SO3392 -61 5.8 TCTTGAATGATCATTCAAAT
SO_3393 SO3393 -64 5.5 TTTTGAATGTTTGTTCAATA
SO_3393 SO3393 -88 5.8 ATTTGAATGATCATTCAAGA
SO_3393 SO3393 -115 7 TCTTGAATGTACGTTCAAGA
Shewanella putrefaciens CN-32
Sputcn32_2720 SO3392 -34 7.2 TCTTGAATGCACATTCAAGA
Sputcn32_2720 SO3392 -85 5.5 TTTTGAACAAACATTCAAAA
Sputcn32_2720 SO3392 -61 5.4 ACTTGAATGTTCATTCAAAT
Sputcn32_2721 SO3393 -68 5.5 TTTTGAATGTTTGTTCAAAA
Sputcn32_2721 SO3393 -92 5.4 ATTTGAATGAACATTCAAGT
Sputcn32_2721 SO3393 -119 7.2 TCTTGAATGTGCATTCAAGA
Shewanella sp W3-18-1
Sputw3181_1292 SO3392 -34 7.2 TCTTGAATGCACATTCAAGA
Sputw3181_1292 SO3392 -85 5.5 TTTTGAACAAACATTCAAAA
Sputw3181_1292 SO3392 -61 5.4 ACTTGAATGTTCATTCAAAT
Sputw3181_1291 SO3393 -68 5.5 TTTTGAATGTTTGTTCAAAA
Sputw3181_1291 SO3393 -92 5.4 ATTTGAATGAACATTCAAGT
Sputw3181_1291 SO3393 -119 7.2 TCTTGAATGTGCATTCAAGA
Shewanella sp ANA-3
Shewana3_1159 SO3392 -34 7.2 TCTTGAATGCACATTCAAGA
Shewana3_1159 SO3392 -85 5.5 TTTTGAACAAACATTCAAAA
Shewana3_1159 SO3392 -61 5.5 TCTTGAATGATCGTTCAAAT
Shewana3_1158 SO3393 -63 5.5 TTTTGAATGTTTGTTCAAAA
Shewana3_1158 SO3393 -87 5.5 ATTTGAACGATCATTCAAGA
Shewana3_1158 SO3393 -114 7.2 TCTTGAATGTGCATTCAAGA
Shewanella sp MR-4
Shewmr4_1158 SO3392 -34 7.2 TCTTGAATGCACATTCAAGA
Shewmr4_1158 SO3392 -85 5.5 TTTTGAACAAACATTCAAAA
Shewmr4_1158 SO3392 -61 5.5 TCTTGAATGATCGTTCAAAT
Shewmr4_1157 SO3393 -64 5.5 TTTTGAATGTTTGTTCAAAA
Shewmr4_1157 SO3393 -88 5.5 ATTTGAACGATCATTCAAGA
Shewmr4_1157 SO3393 -115 7.2 TCTTGAATGTGCATTCAAGA
Shewanella sp MR-7
Shewmr7_1229 SO3392 -34 7 TCTTGAATGCATATTCAAGA
Shewmr7_1229 SO3392 -85 5.5 TTTTGAACAAACATTCAAAA
Shewmr7_1229 SO3392 -61 5.5 TCTTGAATGATCGTTCAAAT
Shewmr7_1228 SO3393 -64 5.5 TTTTGAATGTTTGTTCAAAA
Shewmr7_1228 SO3393 -88 5.5 ATTTGAACGATCATTCAAGA
Shewmr7_1228 SO3393 -115 7 TCTTGAATATGCATTCAAGA
Shewanella baltica OS155
Sbal_1249 SO3392 -34 7 TCTTGAATGCATATTCAAGA
Sbal_1249 SO3392 -85 6 TTTTGAATGAACATTCAAAA
Sbal_1249 SO3392 -61 5 ACTTGAATGATCGTTCAAAT
Sbal_1248 SO3393 -68 6 TTTTGAATGTTCATTCAAAA
Sbal_1248 SO3393 -92 5 ATTTGAACGATCATTCAAGT
Sbal_1248 SO3393 -119 7 TCTTGAATATGCATTCAAGA
Shewanella denitrificans OS217
Sden_1230 SO3392 -32 7.2 TCTTGAATGCACATTCAAGA
Sden_1230 SO3392 -59 5 ACTTGAATGAATGTTCAAAT
Sden_1229 SO3393 41 5 ATTTGAACATTCATTCAAGT
Sden_1229 SO3393 14 7.2 TCTTGAATGTGCATTCAAGA
Shewanella frigidimarina NCIMB 400
Sfri_1089 SO3392 -62 5.6 ACTTGAATGTGCATTCAATT
Sfri_1089 SO3392 -34 7 TCTTGAATGCATATTCAAGA
Sfri_1088 SO3393 -103 5.6 AATTGAATGCACATTCAAGT
Sfri_1088 SO3393 -131 7 TCTTGAATATGCATTCAAGA
Shewanella amazonensis SB2B
Sama_2408 SO3393 -62 5.7 TTTTGAACATACATTCAAAA
Sama_2408 SO3393 -86 6.8 TCTTGAACATACATTCAAGA
Sama_2408 SO3393 -113 5.2 TTTTGAACAGGCATTCAAAA
Sama_2407 SO3392 -35 5.2 TTTTGAATGCCTGTTCAAAA
Sama_2407 SO3392 -62 6.8 TCTTGAATGTATGTTCAAGA
Sama_2407 SO3392 -86 5.7 TTTTGAATGTATGTTCAAAA
Shewanella loihica PV-4
Shew_3099 SO3393 -67 5.8 TTTTGAACGTTCATTCAAAA
Shew_3099 SO3393 -118 6.7 TCTTGAATGAGCGTTCAAGA
Shew_3098 SO3392 -33 6.7 TCTTGAACGCTCATTCAAGA
Shew_3098 SO3392 -84 5.8 TTTTGAATGAACGTTCAAAA
Shewanella piezotolerans WP3
swp_0976 SO3393 49 5.5 TTTTGAACAAACATTCAAAA
swp_0976 SO3393 -2 7 TCTTGAATGAACATTCAAGA
swp_0976 SO3393 25 5 ATTTGAATAATCATTCAAGT
swp_0975 SO3392 -33 7 TCTTGAATGTTCATTCAAGA
swp_0975 SO3392 -60 5 ACTTGAATGATTATTCAAAT
swp_0975 SO3392 -84 5.5 TTTTGAATGTTTGTTCAAAA
Shewanella sediminis HAW-EB3
Ssed_3644 SO3392 -33 7 TCTTGAATGAACATTCAAGA
Ssed_3644 SO3392 -84 5.5 TTTTGAATGTTTGTTCAAAA
Ssed_3644 SO3392 -60 5 ACTTGAATGATCGTTCAAAT
Ssed_3643 SO3393 -77 5.5 TTTTGAACAAACATTCAAAA
Ssed_3643 SO3393 -101 5 ATTTGAACGATCATTCAAGT
Ssed_3643 SO3393 -128 7 TCTTGAATGTTCATTCAAGA
Shewanella woodyi ATCC 51908
Swoo_4056 SO3393 -62 5.5 TTTTGAACAAACATTCAAAA
Swoo_4056 SO3393 -113 7 TCTTGAATGTTCATTCAAGA
Swoo_4056 SO3393 -86 5 ATTTGAACGATCATTCAAGT
Swoo_4055 SO3392 -33 7 TCTTGAATGAACATTCAAGA
Swoo_4055 SO3392 -84 5.5 TTTTGAATGTTTGTTCAAAA
Swoo_4055 SO3392 -60 5 ACTTGAATGATCGTTCAAAT
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