Profile of regulator SO3393 in Shewanellaceae
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Drug resistance |
| Effector: |
|
| Regulog: |
SO3393 - Shewanellaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Shewanella oneidensis MR-1
|
|
SO_3392 |
SO3392 |
-34 |
7 |
TCTTGAACGTACATTCAAGA |
|
SO_3392 |
SO3392 |
-85 |
5.5 |
TATTGAACAAACATTCAAAA |
|
SO_3392 |
SO3392 |
-61 |
5.8 |
TCTTGAATGATCATTCAAAT |
|
SO_3393 |
SO3393 |
-64 |
5.5 |
TTTTGAATGTTTGTTCAATA |
|
SO_3393 |
SO3393 |
-88 |
5.8 |
ATTTGAATGATCATTCAAGA |
|
SO_3393 |
SO3393 |
-115 |
7 |
TCTTGAATGTACGTTCAAGA |
|
Shewanella putrefaciens CN-32
|
|
Sputcn32_2720 |
SO3392 |
-34 |
7.2 |
TCTTGAATGCACATTCAAGA |
|
Sputcn32_2720 |
SO3392 |
-85 |
5.5 |
TTTTGAACAAACATTCAAAA |
|
Sputcn32_2720 |
SO3392 |
-61 |
5.4 |
ACTTGAATGTTCATTCAAAT |
|
Sputcn32_2721 |
SO3393 |
-68 |
5.5 |
TTTTGAATGTTTGTTCAAAA |
|
Sputcn32_2721 |
SO3393 |
-92 |
5.4 |
ATTTGAATGAACATTCAAGT |
|
Sputcn32_2721 |
SO3393 |
-119 |
7.2 |
TCTTGAATGTGCATTCAAGA |
|
Shewanella sp W3-18-1
|
|
Sputw3181_1292 |
SO3392 |
-34 |
7.2 |
TCTTGAATGCACATTCAAGA |
|
Sputw3181_1292 |
SO3392 |
-85 |
5.5 |
TTTTGAACAAACATTCAAAA |
|
Sputw3181_1292 |
SO3392 |
-61 |
5.4 |
ACTTGAATGTTCATTCAAAT |
|
Sputw3181_1291 |
SO3393 |
-68 |
5.5 |
TTTTGAATGTTTGTTCAAAA |
|
Sputw3181_1291 |
SO3393 |
-92 |
5.4 |
ATTTGAATGAACATTCAAGT |
|
Sputw3181_1291 |
SO3393 |
-119 |
7.2 |
TCTTGAATGTGCATTCAAGA |
|
Shewanella sp ANA-3
|
|
Shewana3_1159 |
SO3392 |
-34 |
7.2 |
TCTTGAATGCACATTCAAGA |
|
Shewana3_1159 |
SO3392 |
-85 |
5.5 |
TTTTGAACAAACATTCAAAA |
|
Shewana3_1159 |
SO3392 |
-61 |
5.5 |
TCTTGAATGATCGTTCAAAT |
|
Shewana3_1158 |
SO3393 |
-63 |
5.5 |
TTTTGAATGTTTGTTCAAAA |
|
Shewana3_1158 |
SO3393 |
-87 |
5.5 |
ATTTGAACGATCATTCAAGA |
|
Shewana3_1158 |
SO3393 |
-114 |
7.2 |
TCTTGAATGTGCATTCAAGA |
|
Shewanella sp MR-4
|
|
Shewmr4_1158 |
SO3392 |
-34 |
7.2 |
TCTTGAATGCACATTCAAGA |
|
Shewmr4_1158 |
SO3392 |
-85 |
5.5 |
TTTTGAACAAACATTCAAAA |
|
Shewmr4_1158 |
SO3392 |
-61 |
5.5 |
TCTTGAATGATCGTTCAAAT |
|
Shewmr4_1157 |
SO3393 |
-64 |
5.5 |
TTTTGAATGTTTGTTCAAAA |
|
Shewmr4_1157 |
SO3393 |
-88 |
5.5 |
ATTTGAACGATCATTCAAGA |
|
Shewmr4_1157 |
SO3393 |
-115 |
7.2 |
TCTTGAATGTGCATTCAAGA |
|
Shewanella sp MR-7
|
|
Shewmr7_1229 |
SO3392 |
-34 |
7 |
TCTTGAATGCATATTCAAGA |
|
Shewmr7_1229 |
SO3392 |
-85 |
5.5 |
TTTTGAACAAACATTCAAAA |
|
Shewmr7_1229 |
SO3392 |
-61 |
5.5 |
TCTTGAATGATCGTTCAAAT |
|
Shewmr7_1228 |
SO3393 |
-64 |
5.5 |
TTTTGAATGTTTGTTCAAAA |
|
Shewmr7_1228 |
SO3393 |
-88 |
5.5 |
ATTTGAACGATCATTCAAGA |
|
Shewmr7_1228 |
SO3393 |
-115 |
7 |
TCTTGAATATGCATTCAAGA |
|
Shewanella baltica OS155
|
|
Sbal_1249 |
SO3392 |
-34 |
7 |
TCTTGAATGCATATTCAAGA |
|
Sbal_1249 |
SO3392 |
-85 |
6 |
TTTTGAATGAACATTCAAAA |
|
Sbal_1249 |
SO3392 |
-61 |
5 |
ACTTGAATGATCGTTCAAAT |
|
Sbal_1248 |
SO3393 |
-68 |
6 |
TTTTGAATGTTCATTCAAAA |
|
Sbal_1248 |
SO3393 |
-92 |
5 |
ATTTGAACGATCATTCAAGT |
|
Sbal_1248 |
SO3393 |
-119 |
7 |
TCTTGAATATGCATTCAAGA |
|
Shewanella denitrificans OS217
|
|
Sden_1230 |
SO3392 |
-32 |
7.2 |
TCTTGAATGCACATTCAAGA |
|
Sden_1230 |
SO3392 |
-59 |
5 |
ACTTGAATGAATGTTCAAAT |
|
Sden_1229 |
SO3393 |
41 |
5 |
ATTTGAACATTCATTCAAGT |
|
Sden_1229 |
SO3393 |
14 |
7.2 |
TCTTGAATGTGCATTCAAGA |
|
Shewanella frigidimarina NCIMB 400
|
|
Sfri_1089 |
SO3392 |
-62 |
5.6 |
ACTTGAATGTGCATTCAATT |
|
Sfri_1089 |
SO3392 |
-34 |
7 |
TCTTGAATGCATATTCAAGA |
|
Sfri_1088 |
SO3393 |
-103 |
5.6 |
AATTGAATGCACATTCAAGT |
|
Sfri_1088 |
SO3393 |
-131 |
7 |
TCTTGAATATGCATTCAAGA |
|
Shewanella amazonensis SB2B
|
|
Sama_2408 |
SO3393 |
-62 |
5.7 |
TTTTGAACATACATTCAAAA |
|
Sama_2408 |
SO3393 |
-86 |
6.8 |
TCTTGAACATACATTCAAGA |
|
Sama_2408 |
SO3393 |
-113 |
5.2 |
TTTTGAACAGGCATTCAAAA |
|
Sama_2407 |
SO3392 |
-35 |
5.2 |
TTTTGAATGCCTGTTCAAAA |
|
Sama_2407 |
SO3392 |
-62 |
6.8 |
TCTTGAATGTATGTTCAAGA |
|
Sama_2407 |
SO3392 |
-86 |
5.7 |
TTTTGAATGTATGTTCAAAA |
|
Shewanella loihica PV-4
|
|
Shew_3099 |
SO3393 |
-67 |
5.8 |
TTTTGAACGTTCATTCAAAA |
|
Shew_3099 |
SO3393 |
-118 |
6.7 |
TCTTGAATGAGCGTTCAAGA |
|
Shew_3098 |
SO3392 |
-33 |
6.7 |
TCTTGAACGCTCATTCAAGA |
|
Shew_3098 |
SO3392 |
-84 |
5.8 |
TTTTGAATGAACGTTCAAAA |
|
Shewanella piezotolerans WP3
|
|
swp_0976 |
SO3393 |
49 |
5.5 |
TTTTGAACAAACATTCAAAA |
|
swp_0976 |
SO3393 |
-2 |
7 |
TCTTGAATGAACATTCAAGA |
|
swp_0976 |
SO3393 |
25 |
5 |
ATTTGAATAATCATTCAAGT |
|
swp_0975 |
SO3392 |
-33 |
7 |
TCTTGAATGTTCATTCAAGA |
|
swp_0975 |
SO3392 |
-60 |
5 |
ACTTGAATGATTATTCAAAT |
|
swp_0975 |
SO3392 |
-84 |
5.5 |
TTTTGAATGTTTGTTCAAAA |
|
Shewanella sediminis HAW-EB3
|
|
Ssed_3644 |
SO3392 |
-33 |
7 |
TCTTGAATGAACATTCAAGA |
|
Ssed_3644 |
SO3392 |
-84 |
5.5 |
TTTTGAATGTTTGTTCAAAA |
|
Ssed_3644 |
SO3392 |
-60 |
5 |
ACTTGAATGATCGTTCAAAT |
|
Ssed_3643 |
SO3393 |
-77 |
5.5 |
TTTTGAACAAACATTCAAAA |
|
Ssed_3643 |
SO3393 |
-101 |
5 |
ATTTGAACGATCATTCAAGT |
|
Ssed_3643 |
SO3393 |
-128 |
7 |
TCTTGAATGTTCATTCAAGA |
|
Shewanella woodyi ATCC 51908
|
|
Swoo_4056 |
SO3393 |
-62 |
5.5 |
TTTTGAACAAACATTCAAAA |
|
Swoo_4056 |
SO3393 |
-113 |
7 |
TCTTGAATGTTCATTCAAGA |
|
Swoo_4056 |
SO3393 |
-86 |
5 |
ATTTGAACGATCATTCAAGT |
|
Swoo_4055 |
SO3392 |
-33 |
7 |
TCTTGAATGAACATTCAAGA |
|
Swoo_4055 |
SO3392 |
-84 |
5.5 |
TTTTGAATGTTTGTTCAAAA |
|
Swoo_4055 |
SO3392 |
-60 |
5 |
ACTTGAATGATCGTTCAAAT |
Export
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Regulatory Sites
|
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