Regulon of PaaR in Saccharomonospora viridis DSM 43017
| Regulator type: | Transcription factor |
| TF locus tag: | Svir_26580 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Phenylacetic acid degradation |
| Effector: | Phenylacetyl-CoA |
| Regulog: | PaaR - Frankineae/Propionibacterineae/Pseudonocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
- By trascription factor - PaaR
- By TF family - TetR
- By effector - Phenylacetyl-CoA
- By pathway - Phenylacetic acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -39
Score: 5.3 Sequence: ACTTCCTGAACGTTCGGTTGGT
Locus tag: Svir_26540
Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: Svir_26530
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Svir_26520
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Svir_26510
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Svir_26500
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Svir_26490
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-) |
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paaZ
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Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
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paaA
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Phenylacetate-CoA oxygenase, PaaA subunit
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paaB
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Phenylacetate-CoA oxygenase, PaaB subunit
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paaC
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Phenylacetate-CoA oxygenase, PaaC subunit
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paaD
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Phenylacetate-CoA oxygenase, PaaD subunit
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paaE
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Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
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Position: -116
Score: 5.6 Sequence: ACTGACCGAATGGACGGTTACT
Locus tag: Svir_26550
Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) |
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paaH
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3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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Position: -42
Score: 5.6 Sequence: AGTAACCGTCCATTCGGTCAGT
Locus tag: Svir_26560
Name: paaI Funciton: Phenylacetic acid degradation protein PaaI, thioesterase
Locus tag: Svir_26570
Name: paaK Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
Locus tag: Svir_26580
Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family |
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paaI
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Phenylacetic acid degradation protein PaaI, thioesterase
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paaK
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Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
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paaR
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Transcriptional regulator of phenylacetic acid degradation, TetR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |