Regulon of SdhR in Ralstonia eutropha H16

Properties
Regulator type:	Transcription factor
TF locus tag:	H16_A2633
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Ralstonia
Statistics of regulated genes:
- Genes	14
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 41 sites [see more]

Member of regulog collections

By taxonomy - Ralstonia
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -379 Score: 7.9 Sequence: TCTTATGTCTTATATAAGACATATGA Locus tag: H16_A2634 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) Locus tag: H16_A2635 Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6) Locus tag: H16_A2636 Name: prpC2 Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
	H16_A2634	mdh	Malate dehydrogenase (EC 1.1.1.37)
	H16_A2635	citE	Citrate lyase beta chain (EC 4.1.3.6)
	H16_A2636	prpC2	2-methylcitrate synthase (EC 2.3.3.5)
Position: -77 Score: 7.9 Sequence: TCATATGTCTTATATAAGACATAAGA Locus tag: H16_A2633 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: H16_A2632 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: H16_A2631 Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein Locus tag: H16_A2630 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: H16_A2629 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: H16_A2628 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: H16_A2627 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	H16_A2633	sdhR	Transcriptional regulator of TCA cycle, GntR family
	H16_A2632	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	H16_A2631	sdhD	Succinate dehydrogenase hydrophobic membrane anchor protein
	H16_A2630	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	H16_A2629	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	H16_A2628	COG2938	succinate dehydrogenase iron-sulfur subunit
	H16_A2627	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -132 Score: 6.1 Sequence: TCTTATGTCTTATATAAGACTTTGCC Locus tag: H16_A2211 Name: aceA2 Funciton: Isocitrate lyase (EC 4.1.3.1)
	H16_A2211	aceA2	Isocitrate lyase (EC 4.1.3.1)
Position: -128 Score: 5.2 Sequence: TCTACACTCTTATATAAGACTCATGA Locus tag: H16_A2227 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	H16_A2227	aceA	Isocitrate lyase (EC 4.1.3.1)
Position: -168 Score: 6.3 Sequence: TCTTGTGTCTTATATAAGACTGAAGG Locus tag: H16_A3056 Name: icd Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
	H16_A3056	icd	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Position: -104 Score: 6.6 Sequence: TCTTCACTCTTATATAAGATATAAGA Position: -97 Score: 5.8 Sequence: TCTTATATAAGATATAAGACATTTGA Locus tag: H16_B0568 Name: acnB Funciton: Aconitate hydratase 2 (EC 4.2.1.3)
	H16_B0568	acnB	Aconitate hydratase 2 (EC 4.2.1.3)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of SdhR in Ralstonia eutropha H16

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --