Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SdhR in Ralstonia eutropha H16

Properties
Regulator type: Transcription factor
TF locus tag: H16_A2633
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Regulog: SdhR - Ralstonia
Statistics of regulated genes:
- Genes 14
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 41 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -379
Score: 7.9
Sequence: TCTTATGTCTTATATAAGACATATGA
Locus tag: H16_A2634
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: H16_A2635
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: H16_A2636
Name: prpC2
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
mdh
Malate dehydrogenase (EC 1.1.1.37)
citE
Citrate lyase beta chain (EC 4.1.3.6)
prpC2
2-methylcitrate synthase (EC 2.3.3.5)

Position: -77
Score: 7.9
Sequence: TCATATGTCTTATATAAGACATAAGA
Locus tag: H16_A2633
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: H16_A2632
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: H16_A2631
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: H16_A2630
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: H16_A2629
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: H16_A2628
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: H16_A2627
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR
Transcriptional regulator of TCA cycle, GntR family
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
sdhD
Succinate dehydrogenase hydrophobic membrane anchor protein
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
sdhB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
COG2938
succinate dehydrogenase iron-sulfur subunit
gltA
Citrate synthase (si) (EC 2.3.3.1)

Position: -132
Score: 6.1
Sequence: TCTTATGTCTTATATAAGACTTTGCC
Locus tag: H16_A2211
Name: aceA2
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceA2
Isocitrate lyase (EC 4.1.3.1)

Position: -128
Score: 5.2
Sequence: TCTACACTCTTATATAAGACTCATGA
Locus tag: H16_A2227
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceA
Isocitrate lyase (EC 4.1.3.1)

Position: -168
Score: 6.3
Sequence: TCTTGTGTCTTATATAAGACTGAAGG
Locus tag: H16_A3056
Name: icd
Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
icd
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)

Position: -104
Score: 6.6
Sequence: TCTTCACTCTTATATAAGATATAAGA
Position: -97
Score: 5.8
Sequence: TCTTATATAAGATATAAGACATTTGA
Locus tag: H16_B0568
Name: acnB
Funciton: Aconitate hydratase 2 (EC 4.2.1.3)
acnB
Aconitate hydratase 2 (EC 4.2.1.3)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD