Regulon of SdhR in Cupriavidus taiwanensis

Properties
Regulator type:	Transcription factor
TF locus tag:	RALTA_A2132
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Ralstonia
Statistics of regulated genes:
- Genes	12
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 41 sites [see more]

Member of regulog collections

By taxonomy - Ralstonia
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -360 Score: 7.9 Sequence: TCTTATGTCTTATATAAGACATATGA Locus tag: RALTA_A2133 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
	RALTA_A2133	mdh	Malate dehydrogenase (EC 1.1.1.37)
Position: -254 Score: 7.9 Sequence: TCATATGTCTTATATAAGACATAAGA Locus tag: RALTA_A2132 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: RALTA_A2131 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: RALTA_A2130 Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein Locus tag: RALTA_A2129 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: RALTA_A2128 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: RALTA_A2127 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: RALTA_A2126 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	RALTA_A2132	sdhR	Transcriptional regulator of TCA cycle, GntR family
	RALTA_A2131	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	RALTA_A2130	sdhD	Succinate dehydrogenase hydrophobic membrane anchor protein
	RALTA_A2129	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	RALTA_A2128	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	RALTA_A2127	COG2938	succinate dehydrogenase iron-sulfur subunit
	RALTA_A2126	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -132 Score: 7.5 Sequence: TCTTATGTCTTATATAAGACATAACC Locus tag: RALTA_B0267 Name: aceA2 Funciton: Isocitrate lyase (EC 4.1.3.1)
	RALTA_B0267	aceA2	Isocitrate lyase (EC 4.1.3.1)
Position: -132 Score: 5.4 Sequence: TCTACACTCTTATATAAGACACAGGA Locus tag: RALTA_A1766 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	RALTA_A1766	aceA	Isocitrate lyase (EC 4.1.3.1)
Position: -168 Score: 6.3 Sequence: TCTTGTGTCTTATATAAGACTGAATC Locus tag: RALTA_A2531 Name: icd Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
	RALTA_A2531	icd	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Position: -29 Score: 6.2 Sequence: GATGAACTCTTATATAAGATATAAGA Position: -22 Score: 5.8 Sequence: TCTTATATAAGATATAAGACATTTGA Locus tag: RALTA_B0366 Name: acnB Funciton: Aconitate hydratase 2 (EC 4.2.1.3)
	RALTA_B0366	acnB	Aconitate hydratase 2 (EC 4.2.1.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD