Regulon of SdhR in Burkholderia pseudomallei K96243

Properties
Regulator type:	Transcription factor
TF locus tag:	BPSS1721
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Burkholderia
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 34 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -175 Score: 6.3 Sequence: TCTTTTGTCTTATATAAGACTTGCGC Locus tag: BPSL0896 Name: icd Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
	BPSL0896	icd	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Position: -79 Score: 7.5 Sequence: TCTTATGTCTTATATAAGACAGATGT Locus tag: BPSS1721 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: BPSS1720 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: BPSS1719 Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein Locus tag: BPSS1718 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: BPSS1717 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: BPSS1716 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: BPSS1715 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	BPSS1721	sdhR	Transcriptional regulator of TCA cycle, GntR family
	BPSS1720	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	BPSS1719	sdhD	Succinate dehydrogenase hydrophobic membrane anchor protein
	BPSS1718	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	BPSS1717	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	BPSS1716	COG2938	succinate dehydrogenase iron-sulfur subunit
	BPSS1715	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -245 Score: 7.5 Sequence: ACATCTGTCTTATATAAGACATAAGA Locus tag: BPSS1722 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) Locus tag: BPSS1723 Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6)
	BPSS1722	mdh	Malate dehydrogenase (EC 1.1.1.37)
	BPSS1723	citE	Citrate lyase beta chain (EC 4.1.3.6)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD