Regulon of SdhR in Burkholderia phymatum STM815

Properties
Regulator type:	Transcription factor
TF locus tag:	Bphy_4360
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Burkholderia
Statistics of regulated genes:
- Genes	11
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 34 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -137 Score: 6.1 Sequence: AACCAACTCTTATATAAGACATAAGA Locus tag: Bphy_5855 Name: acnB Funciton: Aconitate hydratase 2 (EC 4.2.1.3)
	Bphy_5855	acnB	Aconitate hydratase 2 (EC 4.2.1.3)
Position: -78 Score: 7.6 Sequence: TCTTATGTCTTATATAAGACATAACT Locus tag: Bphy_4360 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: Bphy_4361 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: Bphy_4362 Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein Locus tag: Bphy_4363 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Bphy_4364 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: Bphy_4365 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: Bphy_4366 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	Bphy_4360	sdhR	Transcriptional regulator of TCA cycle, GntR family
	Bphy_4361	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	Bphy_4362	sdhD	Succinate dehydrogenase hydrophobic membrane anchor protein
	Bphy_4363	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	Bphy_4364	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	Bphy_4365	COG2938	succinate dehydrogenase iron-sulfur subunit
	Bphy_4366	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -262 Score: 6.2 Sequence: GATCCTCTCTTATATAAGACATAGGA Locus tag: Bphy_0565 Name: icd Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
	Bphy_0565	icd	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Position: -39 Score: 7.6 Sequence: AGTTATGTCTTATATAAGACATAAGA Locus tag: Bphy_4359 Name: null Funciton: hypothetical protein Locus tag: Bphy_4358 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
	Bphy_4359		hypothetical protein
	Bphy_4358	mdh	Malate dehydrogenase (EC 1.1.1.37)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD