Regulon of ThiR in Halorhabdus utahensis DSM 12940
| Regulator type: | Transcription factor |
| TF locus tag: | Huta_2411, Huta_2715 |
| Regulator family: | [Other] |
| Regulation mode: | repressor |
| Biological process: | Thiamine transport; Thiamine biosynthesis |
| Effector: | Thiamine phosphate |
| Regulog: | ThiR - Halobacteriales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ThiR
- By taxonomy - Halobacteriales
- By TF family - [Other]
- By effector - Thiamine phosphate
- By pathway - Thiamine transport
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -15
Score: 5.4 Sequence: GTACCACTAAGTGGTAT
Locus tag: Huta_2718
Name: thi4 Funciton: Thiazole biosynthetic enzyme Thi4 |
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thi4
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Thiazole biosynthetic enzyme Thi4
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Position: -43
Score: 5.3 Sequence: GTATCACTAGGTTATAT
Position: -30
Score: 4.9 Sequence: ATATAATCTAGTAGTAC
Locus tag: Huta_2472
Name: thiC Funciton: Thiamin biosynthesis protein ThiC |
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thiC
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Thiamin biosynthesis protein ThiC
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Position: -55
Score: 4.9 Sequence: GTATAATTTGGTAGTAT
Position: -42
Score: 4.2 Sequence: GTATTAGTGAGTTATAA
Locus tag: Huta_0684
Name: tenA1 Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: Huta_0685
Name: tenA2 Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: Huta_0686
Name: thiV Funciton: Predicted thiamin transporter ThiV, SSS family |
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tenA1
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Thiaminase II (EC 3.5.99.2)
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tenA2
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Thiaminase II (EC 3.5.99.2)
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thiV
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Predicted thiamin transporter ThiV, SSS family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |