Regulon of ThiR in Halobacterium sp. NRC-1
| Regulator type: | Transcription factor |
| TF locus tag: | VNG0247C |
| Regulator family: | [Other] |
| Regulation mode: | repressor |
| Biological process: | Thiamine transport; Thiamine biosynthesis |
| Effector: | Thiamine phosphate |
| Regulog: | ThiR - Halobacteriales |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ThiR
- By taxonomy - Halobacteriales
- By TF family - [Other]
- By effector - Thiamine phosphate
- By pathway - Thiamine transport
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -28
Score: 4.2 Sequence: TAATTATCTAGTTGTAC
Position: -15
Score: 4.6 Sequence: GTACCATGTAGTGGTAT
Locus tag: VNG2604Gm
Name: thi4 Funciton: Thiazole biosynthetic enzyme Thi4
Locus tag: VNG2606G
Name: thiDN Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate synthase ThiN (EC 2.5.1.3) |
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thi4
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Thiazole biosynthetic enzyme Thi4
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thiDN
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Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate synthase ThiN (EC 2.5.1.3)
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Position: -30
Score: 4.8 Sequence: TTATTATCTAGTGGTAT
Position: -17
Score: 4.5 Sequence: GTATCACTAAGTAATTG
Locus tag: VNG0715G
Name: thiC Funciton: Thiamin biosynthesis protein ThiC |
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thiC
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Thiamin biosynthesis protein ThiC
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |