Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CblR in Pyrococcus furiosus DSM 3638

Properties
Regulator type: Transcription factor
TF locus tag:
Regulator family:
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector:
Regulog: CblR - Thermococcales
Statistics of regulated genes:
- Genes 22
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 82 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -26
Score: 5.5
Sequence: TTGGATAATTTCTCCAG
Locus tag: PF1947
Name: meaB
Funciton: GTP-dependent assembly of methylmalonyl-CoA mutase
Locus tag: PF1948
Name: mceE
Funciton: Methylmalonyl-CoA epimerase (EC 5.1.99.1)
PF1947
meaB
GTP-dependent assembly of methylmalonyl-CoA mutase
PF1948
mceE
Methylmalonyl-CoA epimerase (EC 5.1.99.1)
Position: -83
Score: 4.6
Sequence: GTGGATAAAAAAGCCAG
Locus tag: PF1477
Name: mutB_N
Funciton: Methylmalonyl-CoA mutase (EC 5.4.99.2), alpha subunit, N-terminal
PF1477
mutB_N
Methylmalonyl-CoA mutase (EC 5.4.99.2), alpha subunit, N-terminal
Position: -25
Score: 5.1
Sequence: TTGGATTAATTAGCCAG
Locus tag: PF0836
Name: cobS
Funciton: Cobalamin-5-phosphate synthase
Locus tag: PF0837
Name: cobS
Funciton: Cobalamin-5-phosphate synthase
Locus tag: PF0838
Name: null
Funciton: Function Code: 16.1 Conserved Hypothetical
Locus tag: PF0839
Name: null
Funciton: Function Code: 16.1 Conserved Hypothetical
Locus tag: PF0840
Name: cobY
Funciton: Adenosylcobinamide-phosphate guanylyltransferase CobY (EC 2.7.7.62)
Locus tag: PF0841
Name: cobY
Funciton: Adenosylcobinamide-phosphate guanylyltransferase CobY (EC 2.7.7.62)
Locus tag: PF0841.1n
Name: null
Funciton: hypothetical protein
PF0836
cobS
Cobalamin-5-phosphate synthase
PF0837
cobS
Cobalamin-5-phosphate synthase
PF0838
Function Code: 16.1 Conserved Hypothetical
PF0839
Function Code: 16.1 Conserved Hypothetical
PF0840
cobY
Adenosylcobinamide-phosphate guanylyltransferase CobY (EC 2.7.7.62)
PF0841
cobY
Adenosylcobinamide-phosphate guanylyltransferase CobY (EC 2.7.7.62)
PF0841.1n
hypothetical protein
Position: -71
Score: 5.6
Sequence: TTGGATATTTAATCCAA
Locus tag: PF0233
Name: sucD
Funciton: Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
PF0233
sucD
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Position: -27
Score: 5.3
Sequence: ATGGATAAAAAATCCAT
Locus tag: PF0303
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
PF0303
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Position: -99
Score: 5.2
Sequence: ATGGATATTTTAGCCAA
Position: -29
Score: 5.6
Sequence: TTGGACAAAATATCCAA
Locus tag: PF1971
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: PF1972
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
PF1971
nrdD
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
PF1972
nrdG
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Position: -19
Score: 4.7
Sequence: TTGGCATATTTGTCCAA
Locus tag: PF0503
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: PF0502
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
PF0503
btuC
Vitamin B12 ABC transporter, permease component BtuC
PF0502
btuD
Vitamin B12 ABC transporter, ATPase component BtuD
Position: -78
Score: 5.1
Sequence: TAGGATAAAATGTCCAA
Locus tag: PF1946
Name: mutB_C
Funciton: B12 binding domain of Methylmalonyl-CoA mutase (EC 5.4.99.2)
PF1946
mutB_C
B12 binding domain of Methylmalonyl-CoA mutase (EC 5.4.99.2)
Position: -19
Score: 5.1
Sequence: GCGGATAAAATATCCAA
Locus tag: PF0296
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: PF0295
Name: null
Funciton: conserved hypothetical protein [Pyrococcus horikoshii]; COG2102: Predicted ATPases of PP-loop superfamily; IPR002761: Domain of unknown function DUF71
Locus tag: PF0294
Name: cobZ
Funciton: Predicted alpha-ribazole-5'-phosphate phosphatase CobZ (EC 3.1.3.73)
Locus tag: PF0293
Name: cobD
Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
PF0296
cbiB
Adenosylcobinamide-phosphate synthase
PF0295
conserved hypothetical protein [Pyrococcus horikoshii]; COG2102: Predicted ATPases of PP-loop superfamily; IPR002761: Domain of unknown function DUF71
PF0294
cobZ
Predicted alpha-ribazole-5'-phosphate phosphatase CobZ (EC 3.1.3.73)
PF0293
cobD
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Position: -72
Score: 5.6
Sequence: TTGGATTTTTTATCCAA
Position: -29
Score: 5.2
Sequence: TTGGATGATTAATCCAA
Locus tag: PF1774
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
PF1774
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise