Profile of regulator CblR in Thermococcales
Properties
| Regulator family: |
|
| Regulation mode: |
|
| Biological process: |
Cobalamin biosynthesis |
| Effector: |
|
| Regulog: |
CblR - Thermococcales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pyrococcus abyssi GE5
|
|
PAB0025 |
cbiB |
-31 |
5 |
TTGGAGCTTTTATCCAA |
|
PAB0349 |
btuF |
-30 |
4.8 |
CTGGACGAATAATCCAG |
|
PAB2319 |
cobZ |
-48 |
5 |
TTGGATAAAAGCTCCAA |
|
PAB2398 |
meaB |
-26 |
5.5 |
TTGGATAAATTCTCCAG |
|
PAB2187 |
mutB_C |
-72 |
5.1 |
TGGGATAATATATCCAT |
|
PAB1800 |
mutB_N |
-81 |
5.3 |
TTAGATAATTTATCCAA |
|
PAB1230 |
sucD |
-62 |
5.6 |
TTGGATATTTAATCCAA |
|
PAB2337 |
nrdD |
58 |
5.5 |
TTGGATTTAATATCCAA |
|
PAB2326 |
cobT |
-27 |
5 |
TTGGATAAAACCTCCAA |
|
PAB1535 |
btuC |
-19 |
5 |
ATGGAATATTTGTCCAA |
|
Pyrococcus furiosus DSM 3638
|
|
PF1774 |
btuF |
-29 |
5.2 |
TTGGATGATTAATCCAA |
|
PF0836 |
cobS |
-25 |
5.1 |
TTGGATTAATTAGCCAG |
|
PF1774 |
btuF |
-72 |
5.6 |
TTGGATTTTTTATCCAA |
|
PF1947 |
meaB |
-26 |
5.5 |
TTGGATAATTTCTCCAG |
|
PF1946 |
mutB_C |
-78 |
5.1 |
TAGGATAAAATGTCCAA |
|
PF1477 |
mutB_N |
-83 |
4.6 |
GTGGATAAAAAAGCCAG |
|
PF0233 |
sucD |
-71 |
5.6 |
TTGGATATTTAATCCAA |
|
PF0296 |
cbiB |
-19 |
5.1 |
GCGGATAAAATATCCAA |
|
PF1971 |
nrdD |
-99 |
5.2 |
ATGGATATTTTAGCCAA |
|
PF1971 |
nrdD |
-29 |
5.6 |
TTGGACAAAATATCCAA |
|
PF0303 |
cobT |
-27 |
5.3 |
ATGGATAAAAAATCCAT |
|
PF0503 |
btuC |
-19 |
4.7 |
TTGGCATATTTGTCCAA |
|
Pyrococcus horikoshii OT3
|
|
PH1659 |
btuF |
-74 |
5.3 |
TTGGACTTTTTATCCAT |
|
PH1659 |
btuF |
-29 |
5.1 |
TTGGACGAATAATCCAA |
|
PH0375 |
null |
-41 |
5.1 |
ATGGATAAAAACTCCAT |
|
PH0376 |
cbiB |
-23 |
5.1 |
ATGGAGTTTTTATCCAT |
|
PH0274 |
meaB |
-26 |
5.5 |
TTGGATAATTTCTCCAG |
|
PH0275 |
mutB_C |
-61 |
4.9 |
CGGGATAAAATATCCAT |
|
PH1306 |
mutB_N |
-77 |
4.9 |
TTGAACAAAATGTCCAA |
|
PH1928 |
sucD |
-63 |
5.5 |
TTGGATATTTAGTCCAA |
|
PH0021 |
nrdD |
-28 |
5.6 |
TTGGACAAAATATCCAA |
|
PH0021 |
nrdD |
-99 |
5.8 |
TTGGATATTTTATCCAA |
|
PH0034 |
cobT |
-19 |
5 |
TTGGACAAAATTTCCAT |
|
PH0790 |
btuC |
-20 |
4.4 |
GTGGCATATTTATCCAA |
|
Thermococcus gammatolerans EJ3
|
|
TGAM_2026 |
mmdA |
-98 |
5.1 |
GTGGACAAATTATCCAC |
|
TGAM_1930 |
meaB |
-25 |
5.5 |
TTGGATAATTTCTCCAG |
|
TGAM_1931 |
mutB_C |
-77 |
5.1 |
GTGGACAAAAAATCCAA |
|
TGAM_1685 |
mutB_N |
-87 |
5.3 |
CTGGACTTTTTATCCAA |
|
TGAM_0218 |
sucD |
-67 |
5.5 |
ATGGATAAAATATCCAT |
|
TGAM_0480 |
btuF |
-17 |
5.4 |
CTGGACAATTAATCCAG |
|
TGAM_0480 |
btuF |
-65 |
5 |
TTGGACGTTATATCCAA |
|
TGAM_0542 |
null |
-41 |
4.8 |
ATGGATAAAAGCTCCAA |
|
TGAM_0543 |
TGAM_0543 |
0 |
4.8 |
TTGGAGCTTTTATCCAT |
|
TGAM_0534 |
cobT |
-27 |
4.9 |
CTGGATAAAAACTCCAC |
|
TGAM_0161 |
nrdD |
-17 |
5.8 |
TTGGATAATTTATCCAG |
|
TGAM_0535 |
cbiP |
-44 |
4.9 |
GTGGAGTTTTTATCCAG |
|
TGAM_0096 |
btuR |
-27 |
5 |
TTGGAGGATTTATCCAT |
|
TGAM_0422 |
nrdJ |
-187 |
5.3 |
ATGGACAAATTATCCGA |
|
TGAM_2054 |
btuC |
-20 |
5 |
CTGGACAAAAACTCCAG |
|
Thermococcus kodakaraensis KOD1
|
|
TK0329 |
meaB |
-27 |
5 |
CTGGATGATTAATCCAG |
|
TK0328 |
mutB_C |
-87 |
5.5 |
CTGGACAAAATATCCAA |
|
TK1149 |
mutB_N |
-89 |
5.6 |
ATGGACAATTTATCCAA |
|
TK1880 |
sucD |
-69 |
5.2 |
ATGGATATAAAATCCAT |
|
TK0862 |
null |
-42 |
5.1 |
ATGGATAAAAACTCCAT |
|
TK0865 |
btuF |
-26 |
5 |
CCGGACAAATAATCCAG |
|
TK0865 |
btuF |
-73 |
4.6 |
TTGGCCGTTTTATCCAA |
|
TK0853 |
cobT |
-27 |
5 |
CTGGATAAAAAGTCCAC |
|
TK2298 |
nrdD |
-35 |
5.8 |
TTGGATAAATTATCCAG |
|
TK2298 |
nrdD |
-127 |
5.9 |
TTGGATAATTTATCCAA |
|
TK2130 |
btuR |
-28 |
5.1 |
CTGGAGATTATGTCCAA |
|
TK1736 |
nrdJ |
-198 |
5 |
ATGGATAATTCGTCCAG |
|
TK2209 |
btuC |
-20 |
5.1 |
CTGGACAAAAAGTCCAG |
|
Thermococcus onnurineus NA1
|
|
TON_0546 |
btuF |
-73 |
5 |
ATGGCCAAAATATCCAA |
|
TON_1075 |
meaB |
-26 |
5.4 |
TTGGATAATTTGTCCGA |
|
TON_1076 |
mutB_C |
-87 |
5.5 |
CTGGACAAAATATCCAA |
|
TON_1110 |
mutB_N |
-88 |
5.5 |
CTGGACAATATATCCAA |
|
TON_1664 |
null |
-29 |
5.1 |
GCGGATAAAATATCCAA |
|
TON_0681 |
null |
-41 |
4.6 |
AAGGATAAAACATCCAA |
|
TON_0546 |
btuF |
-26 |
5.3 |
ATGGACAAATAATCCAG |
|
TON_0680 |
TGAM_0543 |
-18 |
4.6 |
TTGGATGTTTTATCCTT |
|
TON_1870 |
nrdD |
-27 |
5.8 |
TTGGATAAATTATCCAG |
|
TON_0688 |
cobT |
-27 |
4.8 |
TTGGATAAAACCTCCAT |
|
TON_0687 |
cbiP |
-58 |
4.8 |
ATGGAGGTTTTATCCAA |
|
TON_1529 |
btuR |
-31 |
4.4 |
CTGGCGATTATATCCAC |
|
TON_1816 |
nrdJ |
-186 |
5.4 |
TTGGATAATTTGTCCGA |
|
TON_1424 |
btuC |
-21 |
4.9 |
GTGGACAAATAATCCAC |
|
Thermococcus sibiricus MM 739
|
|
TSIB_1577 |
btuF |
56 |
5.6 |
TTGGACAAAATATCCAA |
|
TSIB_1401 |
meaB |
-17 |
5.8 |
TTGGATAATTAATCCAA |
|
TSIB_1402 |
mutB_C |
-87 |
5.7 |
ATGGATAAAATATCCAA |
|
TSIB_0812 |
mutB_N |
-88 |
5.5 |
CTGGATAAAATGTCCAA |
|
TSIB_1142 |
nrdJ |
-185 |
5.4 |
TTGGATAAAATATCCGA |
|
TSIB_1460 |
btuC |
-24 |
5.6 |
TTGGATAAATAATCCAG |
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