Regulon of PdxR in Ruminococcus gnavus ATCC 29149

Properties
Regulator type:	Transcription factor
TF locus tag:	RUMGNA_00641
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine biosynthesis
Effector:	Pyridoxal-5-phosphate
Regulog:	PdxR - Clostridia-3
Statistics of regulated genes:
- Genes	3
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 21 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By trascription factor - PdxR
By TF family - GntR/MocR
By effector - Pyridoxal-5-phosphate
By pathway - Pyridoxine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -101 Score: 11.5 Sequence: AACTGGCAT-(15)-AACTGGATG-(8)-AAGCCAATC Locus tag: RUMGNA_01775 Name: pdxS Funciton: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Locus tag: RUMGNA_01774 Name: pdxT Funciton: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
	RUMGNA_01775	pdxS	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
	RUMGNA_01774	pdxT	Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
Position: -75 Score: 10.9 Sequence: AACTGGACT-(15)-AACTGGACA-(8)-TATCCACTT Locus tag: RUMGNA_02238 Name: pdxU Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
	RUMGNA_02238	pdxU	Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD