Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SO1415 in Shewanella sp MR-4

Properties
Regulator type: Transcription factor
TF locus tag: Shewmr4_0298
Regulator family: TetR
Regulation mode: repressor
Biological process:
Effector:
Regulog: SO1415 - Shewanellaceae
Statistics of regulated genes:
- Genes 6
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 18 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -149
Score: 5.8
Sequence: ATTCGCGAGTAAAGTCACGAAT
Locus tag: Shewmr4_0303
Name: SO1410
Funciton: periplasmic RmlC-type Cupin domain family protein
SO1410
periplasmic RmlC-type Cupin domain family protein

Position: -116
Score: 6.4
Sequence: ATTCACGAGATAACTCACGAAT
Locus tag: Shewmr4_0299
Name: SO1414
Funciton: Flavocytochrome c flavin subunit
Locus tag: Shewmr4_0300
Name: SO1413
Funciton: Flavocytochrome c heme subunit
Locus tag: Shewmr4_0301
Name: SO1412
Funciton: outer membrane beta barrel protein
Locus tag: Shewmr4_0302
Name: SO1411
Funciton: conserved hypothetical outer membrane protein
SO1414
Flavocytochrome c flavin subunit
SO1413
Flavocytochrome c heme subunit
SO1412
outer membrane beta barrel protein
SO1411
conserved hypothetical outer membrane protein

Position: -241
Score: 6.4
Sequence: ATTCGTGAGTTATCTCGTGAAT
Locus tag: Shewmr4_0298
Name: SO1415
Funciton: Transcriptional regulator, TetR family
SO1415
Transcriptional regulator, TetR family
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD