Profile of regulator SO1415 in Shewanellaceae
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
|
| Effector: |
|
| Regulog: |
SO1415 - Shewanellaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Shewanella oneidensis MR-1
|
|
SO_1410 |
SO1410 |
-163 |
5.8 |
ATTCGCGAGTAAAGTCACGAAT |
|
SO_1415 |
SO1415 |
-238 |
6.7 |
ATTCGTGAGACGTCTCTTGAAT |
|
SO_1414 |
SO1414 |
-117 |
6.7 |
ATTCAAGAGACGTCTCACGAAT |
|
Shewanella sp MR-4
|
|
Shewmr4_0303 |
SO1410 |
-149 |
5.8 |
ATTCGCGAGTAAAGTCACGAAT |
|
Shewmr4_0298 |
SO1415 |
-241 |
6.4 |
ATTCGTGAGTTATCTCGTGAAT |
|
Shewmr4_0299 |
SO1414 |
-116 |
6.4 |
ATTCACGAGATAACTCACGAAT |
|
Shewanella loihica PV-4
|
|
Shew_0272 |
SO1410 |
-151 |
6.3 |
ATTCGCGAGCCAAGTCACGAAT |
|
Shew_0277 |
SO1415 |
-235 |
6.3 |
ATTCGTGAACCATGTCCCGAAT |
|
Shew_0276 |
SO1414 |
-118 |
6.3 |
ATTCGGGACATGGTTCACGAAT |
|
Shewanella pealeana ATCC 700345
|
|
Spea_0321 |
SO1410 |
-157 |
5.9 |
ATTCGCGACCGAGCTCACGAAT |
|
Spea_0326 |
SO1415 |
-247 |
6.8 |
ATTCGTGAGTCAGCTCTCGAAT |
|
Spea_0325 |
SO1414 |
-119 |
6.8 |
ATTCGAGAGCTGACTCACGAAT |
|
Shewanella halifaxensis HAW-EB4
|
|
Shal_3970 |
SO1410 |
-156 |
6.3 |
ATTCGCGACTTGGCTCACGAAT |
|
Shal_3965 |
SO1415 |
-247 |
6.7 |
ATTCGTGAGGCAGCTCTCGAAT |
|
Shal_3966 |
SO1414 |
-119 |
6.7 |
ATTCGAGAGCTGCCTCACGAAT |
|
Shewanella sediminis HAW-EB3
|
|
Ssed_4188 |
SO1410 |
-154 |
6 |
ATTCGCGAGCTCTGTCACGAAT |
|
Ssed_4183 |
SO1415 |
-259 |
5.9 |
ATTCGTGAAGCAGATCTCGAAG |
|
Ssed_4184 |
SO1414 |
-116 |
5.9 |
CTTCGAGATCTGCTTCACGAAT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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