Regulon of SO0072 in Shewanella woodyi ATCC 51908
| Regulator type: | Transcription factor |
| TF locus tag: | Swoo_4863 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Hypothetical ABC transporter |
| Effector: | |
| Regulog: | SO0072 - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - GntR/Others
- By pathway - Hypothetical ABC transporter
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -34
Score: 7.1 Sequence: TGTATCAATGTATTAATACA
Locus tag: Swoo_4863
Name: SO0072 Funciton: Transcriptional regulator, GntR family, YtrA subfamily
Locus tag: Swoo_4862
Name: SO0073 Funciton: ABC transporter, ATP-binding protein
Locus tag: Swoo_4861
Name: SO0074 Funciton: ABC transporter permease protein |
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SO0072
|
Transcriptional regulator, GntR family, YtrA subfamily
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SO0073
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ABC transporter, ATP-binding protein
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SO0074
|
ABC transporter permease protein
|
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Position: -75
Score: 7.1 Sequence: TGTATTAATACATTGATACA
Locus tag: Swoo_4864
Name: PF00561 Funciton: Hydrolase, alpha/beta hydrolase fold family
Locus tag: Swoo_4865
Name: COG4555 Funciton: Putative ABC-type Na+ transport system, ATPase component
Locus tag: Swoo_4866
Name: COG1668 Funciton: Predicted ABC-type Na+ efflux pump, permease component
Locus tag: Swoo_4867
Name: SO0068 Funciton: hypothetical protein |
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PF00561
|
Hydrolase, alpha/beta hydrolase fold family
|
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COG4555
|
Putative ABC-type Na+ transport system, ATPase component
|
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COG1668
|
Predicted ABC-type Na+ efflux pump, permease component
|
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SO0068
|
hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |