Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator SO0072 in Shewanellaceae

Properties
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Hypothetical ABC transporter
Effector:
Regulog: SO0072 - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_0072 SO0072 -34 7.1 TGTATCAATGTATTAATACA
SO0071 PF00561 -78 7.1 TGTATTAATACATTGATACA
Shewanella putrefaciens CN-32
Sputcn32_0058 SO0072 -34 7.1 TGTATCAATGTATTAATACA
Sputcn32_0057 PF00561 -79 7.1 TGTATTAATACATTGATACA
Shewanella sp W3-18-1
Sputw3181_4020 SO0072 -34 7.1 TGTATCAATGTATTAATACA
Sputw3181_4021 PF00561 -79 7.1 TGTATTAATACATTGATACA
Shewanella sp ANA-3
Shewana3_0077 SO0072 -34 7.1 TGTATCAATGTATTAATACA
Shewana3_0076 PF00561 -78 7.1 TGTATTAATACATTGATACA
Shewanella sp MR-4
Shewmr4_0075 SO0072 -34 7.1 TGTATCAATGTATTAATACA
Shewmr4_0074 PF00561 -78 7.1 TGTATTAATACATTGATACA
Shewanella sp MR-7
Shewmr7_0073 SO0072 -34 7.1 TGTATCAATGTATTAATACA
Shewmr7_0072 PF00561 -78 7.1 TGTATTAATACATTGATACA
Shewanella baltica OS155
Sbal_4277 SO0072 -34 7.1 TGTATCAATGTATTAATACA
Sbal_4278 PF00561 -79 7.1 TGTATTAATACATTGATACA
Shewanella denitrificans OS217
Sden_0069 SO0072 -34 6.9 TGTATCAATGAATTAATACA
Sden_0068 PF00561 -73 6.9 TGTATTAATTCATTGATACA
Shewanella frigidimarina NCIMB 400
Sfri_3976 SO0072 -34 7.1 TGTATCAATGTATTAATACA
Sfri_3977 PF00561 -80 7.1 TGTATTAATACATTGATACA
Shewanella amazonensis SB2B
Sama_3574 SO0072 -34 7.1 TGTATCAATGTATTAATACA
Sama_3575 PF00561 -75 7.1 TGTATTAATACATTGATACA
Sama_3575 PF00561 -83 6.1 TGAATCACTGTATTAATACA
Shewanella loihica PV-4
Shew_3779 SO0072 -34 7.1 TGTATCAATGTATTAATACA
Shew_3780 PF00561 -101 7.1 TGTATTAATACATTGATACA
Shewanella pealeana ATCC 700345
Spea_4189 SO0072 -34 7.1 TGTATCAATGTATTAATACA
Spea_4190 PF00561 -76 7.1 TGTATTAATACATTGATACA
Shewanella piezotolerans WP3
swp_0109 SO0072 -34 7.1 TGTATCAATGTATTAATACA
swp_0108 PF00561 -133 7.1 TGTATTAATACATTGATACA
Shewanella woodyi ATCC 51908
Swoo_4863 SO0072 -34 7.1 TGTATCAATGTATTAATACA
Swoo_4864 PF00561 -75 7.1 TGTATTAATACATTGATACA
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