Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SO0072 in Shewanella piezotolerans WP3

Properties
Regulator type: Transcription factor
TF locus tag: swp_0109
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Hypothetical ABC transporter
Effector:
Regulog: SO0072 - Shewanellaceae
Statistics of regulated genes:
- Genes 6
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 29 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -34
Score: 7.1
Sequence: TGTATCAATGTATTAATACA
Locus tag: swp_0109
Name: SO0072
Funciton: Transcriptional regulator, GntR family, YtrA subfamily
Locus tag: swp_0110
Name: SO0073
Funciton: ABC transporter, ATP-binding protein
Locus tag: swp_0111
Name: SO0074
Funciton: ABC transporter permease protein
SO0072
Transcriptional regulator, GntR family, YtrA subfamily
SO0073
ABC transporter, ATP-binding protein
SO0074
ABC transporter permease protein

Position: -133
Score: 7.1
Sequence: TGTATTAATACATTGATACA
Locus tag: swp_0108
Name: PF00561
Funciton: Hydrolase, alpha/beta hydrolase fold family
Locus tag: swp_0106
Name: COG4555
Funciton: Putative ABC-type Na+ transport system, ATPase component
Locus tag: swp_0105
Name: COG1668
Funciton: Predicted ABC-type Na+ efflux pump, permease component
PF00561
Hydrolase, alpha/beta hydrolase fold family
COG4555
Putative ABC-type Na+ transport system, ATPase component
COG1668
Predicted ABC-type Na+ efflux pump, permease component
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