Regulon of HmgR in Pseudomonas syringae pv. tomato str. DC3000

Properties
Regulator type:	Transcription factor
TF locus tag:	PSPTO3552
Regulator family:	IclR
Regulation mode:	repressor
Biological process:	Tyrosine degradation
Effector:	Homogentisate
Regulog:	HmgR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 12 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By TF family - IclR
By effector - Homogentisate
By pathway - Tyrosine degradation

Regulated operons
	Locus Tag	Name	Function
Position: -84 Score: 5.5 Sequence: ATCGTAAAACAATTACGCA Locus tag: PSPTO3552 Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, IclR family
	PSPTO3552	hmgR	Tyrosine degradation transcriptional regulator, IclR family
Position: -62 Score: 4.7 Sequence: TGCGTAATGTGGTTACAAA Locus tag: PSPTO3554 Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) Locus tag: PSPTO3553 Name: hpd Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
	PSPTO3554	hmgB	Maleylacetoacetate isomerase (EC 5.2.1.2)
	PSPTO3553	hpd	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
Position: -63 Score: 5.5 Sequence: TGCGTAATTGTTTTACGAT Locus tag: PSPTO3551 Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) Locus tag: PSPTO3550 Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
	PSPTO3551	hmgA	Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
	PSPTO3550	hmgC	Fumarylacetoacetase (EC 3.7.1.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD