Regulon of HmgR in Pseudomonas fluorescens Pf-5

Properties
Regulator type:	Transcription factor
TF locus tag:	PFL_0966
Regulator family:	IclR
Regulation mode:	repressor
Biological process:	Tyrosine degradation
Effector:	Homogentisate
Regulog:	HmgR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	5
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 12 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By TF family - IclR
By effector - Homogentisate
By pathway - Tyrosine degradation

Regulated operons
	Locus Tag	Name	Function
Position: -90 Score: 6.3 Sequence: ATCGTAATCCAATTACGCA Position: -70 Score: 5 Sequence: AACGTAATTTGATTGCCCA Locus tag: PFL_0966 Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, IclR family
	PFL_0966	hmgR	Tyrosine degradation transcriptional regulator, IclR family
Position: -96 Score: 6.3 Sequence: TGCGTAATTGGATTACGAT Locus tag: PFL_0967 Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) Locus tag: PFL_0968 Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2) Locus tag: PFL_0969 Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) Locus tag: PFL_0970 Name: COG2814 Funciton: Predicted tyrosine transporter, COG2814 family
	PFL_0967	hmgA	Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
	PFL_0968	hmgC	Fumarylacetoacetase (EC 3.7.1.2)
	PFL_0969	hmgB	Maleylacetoacetate isomerase (EC 5.2.1.2)
	PFL_0970	COG2814	Predicted tyrosine transporter, COG2814 family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD