Regulon of GcvR in Pseudomonas mendocina ymp
| Regulator type: | Transcription factor |
| TF locus tag: | Pmen_1348 |
| Regulator family: | TyrR |
| Regulation mode: | activator |
| Biological process: | Glycine metabolism |
| Effector: | Glycine |
| Regulog: | GcvR - Pseudomonadales |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By TF family - TyrR
- By effector - Glycine
- By pathway - Glycine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -258
Score: 5.8 Sequence: CTGTATCGATATCGATCCAC
Position: -239
Score: 4.7 Sequence: CCGTAACGATTTAGCAACAA
Position: -158
Score: 5.7 Sequence: TCGTATCGATATCGTTCCAG
Locus tag: Pmen_1346
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: Pmen_1345
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: Pmen_1344
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
Locus tag: Pmen_1343
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
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gcvH
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Glycine cleavage system H protein
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gcvP
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Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
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glyA
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Serine hydroxymethyltransferase (EC 2.1.2.1)
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gcvT
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Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |