Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of ScrR in Shewanella frigidimarina NCIMB 400

Properties
Regulator type: Transcription factor
TF locus tag: Sfri_3991
Regulator family: LacI
Regulation mode: repressor
Biological process: Sucrose utilization
Effector: Sucrose
Regulog: ScrR - Shewanellaceae
Statistics of regulated genes:
- Genes 5
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 16 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -90
Score: 6.6
Sequence: AACTTAATCGAATAAGTT
Locus tag: Sfri_4008
Name: omp(Scr)2
Funciton: predicted sucrose-specific TonB-dependent receptor
omp(Scr)2
predicted sucrose-specific TonB-dependent receptor

Position: -50
Score: 7.1
Sequence: AACTTAATCGATTAAGTT
Locus tag: Sfri_3990
Name: scrP
Funciton: Sucrose phosphorylase (EC 2.4.1.7)
scrP
Sucrose phosphorylase (EC 2.4.1.7)

Position: -156
Score: 7.1
Sequence: AACTTAATCGATTAAGTT
Locus tag: Sfri_3989
Name: scrT
Funciton: Predicted sucrose permease, MFS family, FucP subfamily
scrT
Predicted sucrose permease, MFS family, FucP subfamily

Position: -147
Score: 6.8
Sequence: AACTTAATCGATTAAGTC
Locus tag: Sfri_3988
Name: omp(Scr)
Funciton: Predicted sucrose-specific TonB-dependent receptor
Locus tag: Sfri_3987
Name: scrK
Funciton: Fructokinase (EC 2.7.1.4)
omp(Scr)
Predicted sucrose-specific TonB-dependent receptor
scrK
Fructokinase (EC 2.7.1.4)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD