Regulon of YdcR in Pseudomonas fluorescens Pf-5

Properties
Regulator type:	Transcription factor
TF locus tag:	PFL_2868
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Regulog:	YdcR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	8
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 10 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By TF family - GntR/MocR

Regulated operons
	Locus Tag	Name	Function
Position: -203 Score: 7.8 Sequence: AGCTGATCCGCTTTT-(9)-TTCTGATCTTTTTTT Locus tag: PFL_0053 Name: gadh3 Funciton: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit Locus tag: PFL_0054 Name: gadh1 Funciton: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein Locus tag: PFL_0055 Name: gadh2 Funciton: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c
	PFL_0053	gadh3	Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit
	PFL_0054	gadh1	Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein
	PFL_0055	gadh2	Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c
Position: -120 Score: 8.1 Sequence: ATCTGATCCGTATTA-(9)-TTCTGAGCCTGTTTT Locus tag: PFL_2834 Name: ccoN Funciton: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)
	PFL_2834	ccoN	Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)
Position: -97 Score: 9.4 Sequence: ATCTGATCCGGTTTT-(9)-ACCTGAGTCTGTTAT Locus tag: PFL_2869 Name: COG0348 Funciton: Polyferredoxin Locus tag: PFL_2868 Name: ydcR Funciton: Transcriptional regulator, GntR family
	PFL_2869	COG0348	Polyferredoxin
	PFL_2868	ydcR	Transcriptional regulator, GntR family
Position: -118 Score: 7.1 Sequence: GGCTGATATGGTTTT-(9)-ACCTGAATCTGTAAC Locus tag: PFL_2835 Name: cysI Funciton: Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) Locus tag: PFL_2836 Name: COG3749 Funciton: Oxidoreductase probably involved in sulfite reduction
	PFL_2835	cysI	Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)
	PFL_2836	COG3749	Oxidoreductase probably involved in sulfite reduction

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD