Statistics of regulated genes

Genome	Genes	Operons
Azotobacter vinelandii AvOP
Pseudomonas aeruginosa PAO1	3	2
Pseudomonas entomophila L48	2	1
Pseudomonas fluorescens Pf-5	8	4
Pseudomonas mendocina ymp	2	1
Pseudomonas putida KT2440	2	1
Pseudomonas stutzeri A1501	2	1
Pseudomonas syringae pv. tomato str. DC3000

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes									Function
CRON 1.
ccoN	Azotobacter vinelandii AvOP	* Pseudomonas aeruginosa PAO1 Site: position = -137 score = 7.23758 sequence = ATCTGATACCCAAAT-(9)-ACCTGAAGCTGTTTT Gene: PA4133: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)	Pseudomonas entomophila L48	* Pseudomonas fluorescens Pf-5 Site: position = -120 score = 8.07576 sequence = ATCTGATCCGTATTA-(9)-TTCTGAGCCTGTTTT Gene: PFL_2834: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)	Pseudomonas mendocina ymp	Pseudomonas putida KT2440	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)
CRON 2.
cysI	Azotobacter vinelandii AvOP	* Pseudomonas aeruginosa PAO1 Site: position = -183 score = 7.892 sequence = ATCTGATGTGTTTTT-(9)-ATCTGCCGCTGTTTC Gene: PA4130: Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)	Pseudomonas entomophila L48	* Pseudomonas fluorescens Pf-5 Site: position = -118 score = 7.1348 sequence = GGCTGATATGGTTTT-(9)-ACCTGAATCTGTAAC Gene: PFL_2835: Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)	Pseudomonas mendocina ymp	Pseudomonas putida KT2440	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)
COG3749	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA4129: Oxidoreductase probably involved in sulfite reduction	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5 Gene: PFL_2836: Oxidoreductase probably involved in sulfite reduction	Pseudomonas mendocina ymp	Pseudomonas putida KT2440	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Oxidoreductase probably involved in sulfite reduction
CRON 3.
COG0348	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA4131: Polyferredoxin	* Pseudomonas entomophila L48 Site: position = -98 score = 8.54989 sequence = ATCTGATATGGTTTT-(9)-ACCTGAGTCTGTGCT Gene: PSEEN2987: Polyferredoxin	* Pseudomonas fluorescens Pf-5 Site: position = -97 score = 9.43236 sequence = ATCTGATCCGGTTTT-(9)-ACCTGAGTCTGTTAT Gene: PFL_2869: Polyferredoxin	* Pseudomonas mendocina ymp Site: position = -99 score = 9.00965 sequence = ATCTGATCCGCTTTT-(9)-ACCTGAGTCTGTTTT Gene: Pmen_3094: Polyferredoxin	* Pseudomonas putida KT2440 Site: position = -98 score = 8.7785 sequence = ATCTGATATGGTTTT-(9)-ATCTGAACCTGTGCT Gene: PP3543: Polyferredoxin	* Pseudomonas stutzeri A1501 Site: position = -97 score = 8.76249 sequence = ATCTGATCCGTATTT-(9)-ATCTGAGTCTGTTAT Gene: PST_2730: Polyferredoxin	Pseudomonas syringae pv. tomato str. DC3000	Polyferredoxin
ydcR	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA4132: Transcriptional regulator, GntR family	Pseudomonas entomophila L48 Gene: PSEEN2988: Transcriptional regulator, GntR family	Pseudomonas fluorescens Pf-5 Gene: PFL_2868: Transcriptional regulator, GntR family	Pseudomonas mendocina ymp Gene: Pmen_3095: Transcriptional regulator, GntR family	Pseudomonas putida KT2440 Gene: PP3544: Transcriptional regulator, GntR family	Pseudomonas stutzeri A1501 Gene: PST_2731: Transcriptional regulator, GntR family	Pseudomonas syringae pv. tomato str. DC3000	Transcriptional regulator, GntR family
CRON 4.
gadh3	Azotobacter vinelandii AvOP Gene: Avin_00890: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit	Pseudomonas aeruginosa PAO1 Gene: PA2264: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit	Pseudomonas entomophila L48	* Pseudomonas fluorescens Pf-5 Site: position = -203 score = 7.80628 sequence = AGCTGATCCGCTTTT-(9)-TTCTGATCTTTTTTT Gene: PFL_0053: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP3384: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit
gadh1	Azotobacter vinelandii AvOP Gene: Avin_00900: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein	Pseudomonas aeruginosa PAO1 Gene: PA2265: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5 Gene: PFL_0054: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP3383: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein
gadh2	Azotobacter vinelandii AvOP Gene: Avin_00910: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c	Pseudomonas aeruginosa PAO1 Gene: PA2266: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5 Gene: PFL_0055: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP3382: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c

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