Profile of regulator YdcR in Pseudomonadaceae
Properties
| Regulator family: |
GntR/MocR |
| Regulation mode: |
|
| Biological process: |
|
| Effector: |
|
| Regulog: |
YdcR - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA4130 |
cysI |
-183 |
7.9 |
ATCTGATGTGTTTTT-(9)-ATCTGCCGCTGTTTC |
|
PA4133 |
ccoN |
-137 |
7.2 |
ATCTGATACCCAAAT-(9)-ACCTGAAGCTGTTTT |
|
Pseudomonas entomophila L48
|
|
PSEEN2987 |
COG0348 |
-98 |
8.5 |
ATCTGATATGGTTTT-(9)-ACCTGAGTCTGTGCT |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_2834 |
ccoN |
-120 |
8.1 |
ATCTGATCCGTATTA-(9)-TTCTGAGCCTGTTTT |
|
PFL_2869 |
COG0348 |
-97 |
9.4 |
ATCTGATCCGGTTTT-(9)-ACCTGAGTCTGTTAT |
|
PFL_2835 |
cysI |
-118 |
7.1 |
GGCTGATATGGTTTT-(9)-ACCTGAATCTGTAAC |
|
PFL_0053 |
gadh3 |
-203 |
7.8 |
AGCTGATCCGCTTTT-(9)-TTCTGATCTTTTTTT |
|
Pseudomonas mendocina ymp
|
|
Pmen_3094 |
COG0348 |
-99 |
9 |
ATCTGATCCGCTTTT-(9)-ACCTGAGTCTGTTTT |
|
Pseudomonas putida KT2440
|
|
PP3543 |
COG0348 |
-98 |
8.8 |
ATCTGATATGGTTTT-(9)-ATCTGAACCTGTGCT |
|
Pseudomonas stutzeri A1501
|
|
PST_2730 |
COG0348 |
-97 |
8.8 |
ATCTGATCCGTATTT-(9)-ATCTGAGTCTGTTAT |
Export
|
Regulatory Sites
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[ FASTA format ]
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