Regulon of YdcR in Burkholderia phymatum STM815

Properties
Regulator type:	Transcription factor
TF locus tag:	Bphy_6904, Bphy_6902, Bphy_3581
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Regulog:	YdcR - Burkholderia
Statistics of regulated genes:
- Genes	7
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By TF family - GntR/MocR

Regulated operons
	Locus Tag	Name	Function
Position: -126 Score: 8.6 Sequence: ATCTGATACGCATGT-(10)-AACTGCTACTCGTTT Locus tag: Bphy_6906 Name: null Funciton: Rtn protein Locus tag: Bphy_6905 Name: null Funciton: diguanylate cyclase with PAS/PAC sensor
	Bphy_6906		Rtn protein
	Bphy_6905		diguanylate cyclase with PAS/PAC sensor
Position: -108 Score: 7.8 Sequence: CGCTGCTGCGCTGGA-(9)-ATCTGCTTCTTACGC Locus tag: Bphy_3580 Name: PF11174 Funciton: Protein of unknown function DUF2970
	Bphy_3580	PF11174	Protein of unknown function DUF2970
Position: -170 Score: 7 Sequence: ATCTGCTGCCGTCAT-(9)-ATCTGCGTCTTGCCG Locus tag: Bphy_5829 Name: cysI Funciton: Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) Locus tag: Bphy_5828 Name: COG3749 Funciton: Oxidoreductase probably involved in sulfite reduction
	Bphy_5829	cysI	Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)
	Bphy_5828	COG3749	Oxidoreductase probably involved in sulfite reduction
Position: -158 Score: 7.6 Sequence: ATCTGATACGGCGTT-(9)-ATCTGCTGCTATTGC Locus tag: Bphy_6903 Name: COG4943 Funciton: Predicted signal transduction protein containing sensor and EAL domains Locus tag: Bphy_6902 Name: ydcR2 Funciton: Transcriptional regulator, GntR family
	Bphy_6903	COG4943	Predicted signal transduction protein containing sensor and EAL domains
	Bphy_6902	ydcR2	Transcriptional regulator, GntR family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD