Profile of regulator YdcR in Burkholderia
Properties
| Regulator family: |
GntR/MocR |
| Regulation mode: |
|
| Biological process: |
|
| Effector: |
|
| Regulog: |
YdcR - Burkholderia |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Burkholderia cepacia AMMD
|
|
Bamb_4499 |
COG0823 |
-192 |
8.8 |
TGCTGATCCGCACGT-(10)-CTCTGATCCTTTTCT |
|
Bamb_3929 |
cysI |
-143 |
9.4 |
ATCTGCTGCGCCCTT-(9)-ATCTGCTGCTTGTCC |
|
Bamb_5419 |
PF11174 |
-94 |
6.9 |
CCGTGCTGCGCAAAA-(9)-AACTGCTTCTTTTTC |
|
Burkholderia mallei ATCC 23344
|
|
BMA3052 |
cysI |
-145 |
9.4 |
ATCTGCTGCGCAAAA-(9)-ATCTGCTGCTTGTTG |
|
Burkholderia phymatum STM815
|
|
Bphy_6903 |
COG4943 |
-158 |
7.6 |
ATCTGATACGGCGTT-(9)-ATCTGCTGCTATTGC |
|
Bphy_5829 |
cysI |
-170 |
7 |
ATCTGCTGCCGTCAT-(9)-ATCTGCGTCTTGCCG |
|
Bphy_3580 |
PF11174 |
-108 |
7.8 |
CGCTGCTGCGCTGGA-(9)-ATCTGCTTCTTACGC |
|
Bphy_6906 |
null |
-126 |
8.6 |
ATCTGATACGCATGT-(10)-AACTGCTACTCGTTT |
|
Burkholderia pseudomallei K96243
|
|
BPSL1319 |
cysI |
-145 |
9.4 |
ATCTGCTGCGCAAAA-(9)-ATCTGCTGCTTGTTG |
|
BPSL1320 |
PF11174 |
-112 |
8.7 |
ATCTGCTGCGCGAAA-(9)-AACTGCTGCTTTCCT |
|
Burkholderia sp. 383
|
|
Bcep18194_B1354 |
cysI |
-143 |
9.4 |
ATCTGCTGCGCCCTT-(9)-ATCTGCTGCTTGTCC |
|
Bcep18194_B0569 |
COG0823 |
-201 |
8 |
CCGTGATCCGCTTGT-(10)-CTCTGATCCTGTTTT |
|
Bcep18194_B2437 |
PF11174 |
-94 |
7.2 |
GCCTGCTGCGCGAAA-(9)-AACTGCTTCTTTTTT |
|
Burkholderia vietnamiensis G4
|
|
Bcep1808_4100 |
PF11174 |
-94 |
6.2 |
GCGTGCTGCGCTAAA-(9)-AACTGCTTCTTTTTC |
|
Bcep1808_6068 |
cysI |
-105 |
7.4 |
CACTGCTACGCTCGT-(9)-GTCTGCTGCTTTAAC |
|
Burkholderia xenovorans LB400
|
|
Bxe_B0922 |
cysI |
-269 |
7.3 |
ATCTGCTACCGCGAT-(9)-ATCTGCTACTTTTCA |
|
Bxe_B0923 |
PF11174 |
-103 |
6.9 |
GACTGCTACGTTCGA-(9)-AACTGCTACTTCTTT |
Export
|
Regulatory Sites
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[ FASTA format ]
|
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