Regulon of SO2282 in Shewanella amazonensis SB2B
| Regulator type: | Transcription factor |
| TF locus tag: | Sama_2016 |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Metabolite transport |
| Effector: | |
| Regulog: | SO2282 - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - GntR/MocR
- By pathway - Metabolite transport
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -152
Score: 6.1 Sequence: CATTGTGAG-(0)-GCAACAATT
Locus tag: Sama_2017
Name: PF07690 Funciton: Drug resistance transporter, Bcr/CflA subfamily |
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PF07690
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Drug resistance transporter, Bcr/CflA subfamily
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Position: -86
Score: 8.4 Sequence: AATTGTATG-(0)-GATACAATA
Position: -7
Score: 8 Sequence: TATTGTCAT-(1)-CGTACAATT
Locus tag: Sama_2016
Name: SO2282 Funciton: Transcriptional regulator, GntR family |
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SO2282
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Transcriptional regulator, GntR family
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Position: -111
Score: 8 Sequence: AATTGTACG-(1)-ATGACAATA
Position: -31
Score: 8.4 Sequence: TATTGTATC-(0)-CATACAATT
Locus tag: Sama_2015
Name: PF01810 Funciton: Transporter, LysE family |
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PF01810
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Transporter, LysE family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |