Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator SO2282 in Shewanellaceae

Properties
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport
Effector:
Regulog: SO2282 - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella amazonensis SB2B
Sama_2016 SO2282 -86 8.4 AATTGTATG-(0)-GATACAATA
Sama_2016 SO2282 -7 8 TATTGTCAT-(1)-CGTACAATT
Sama_2017 PF07690 -152 6.1 CATTGTGAG-(0)-GCAACAATT
Sama_2015 PF01810 -111 8 AATTGTACG-(1)-ATGACAATA
Sama_2015 PF01810 -31 8.4 TATTGTATC-(0)-CATACAATT
Shewanella baltica OS155
Sbal_2383 SO2282 -82 7.6 AATTGTATG-(0)-CATACATTT
Sbal_2383 SO2282 -7 7.7 TATTGTCAT-(1)-AGTACAATC
Sbal_2385 PF07690 -79 7.6 AATTGTTCT-(0)-AGTACAATT
Sbal_2382 PF01810 -68 7.7 GATTGTACT-(1)-ATGACAATA
Sbal_2382 PF01810 8 7.6 AAATGTATG-(0)-CATACAATT
Shewanella halifaxensis HAW-EB4
Shal_1726 SO2282 -85 7.6 AATTGTATG-(0)-CATACAAAA
Shal_1726 SO2282 -7 7.8 TATTGTCAT-(1)-GGTACAATC
Shal_1727 PF01810 -94 7.6 TTTTGTATG-(0)-CATACAATT
Shal_1727 PF01810 -173 7.8 GATTGTACC-(1)-ATGACAATA
Shewanella oneidensis MR-1
SO2282 SO2282 -7 8.1 TATTGTCAT-(1)-GGTACAATT
SO2282 SO2282 -82 8.1 TATTGTACG-(0)-CATACAATT
SO2280 PF07690 -75 7.2 AATTGTTAC-(0)-CCTACAATT
Shewanella pealeana ATCC 700345
Spea_2527 SO2282 -85 8.1 AATTGTATG-(0)-AGTACAATA
Spea_2527 SO2282 -7 7.7 TATTGTTAT-(1)-GGTACAATT
Spea_2526 PF01810 -97 8.1 TATTGTACT-(0)-CATACAATT
Spea_2526 PF01810 -176 7.7 AATTGTACC-(1)-ATAACAATA
Shewanella piezotolerans WP3
swp_1877 SO2282 59 8.1 TATTGTCAT-(1)-GGTACAATT
swp_1877 SO2282 -19 8.1 TATTGTACG-(0)-CATACAATT
swp_1879 PF01810 -145 8.1 AATTGTATG-(0)-CGTACAATA
swp_1879 PF01810 -224 8.1 AATTGTACC-(1)-ATGACAATA
Shewanella putrefaciens CN-32
Sputcn32_2134 SO2282 -7 7.6 TATTGTTAT-(1)-AGTACAATT
Sputcn32_2134 SO2282 -82 7 AATTGTATG-(0)-CATACATTG
Sputcn32_2133 PF01810 -104 7.6 AATTGTACT-(1)-ATAACAATA
Sputcn32_2133 PF01810 -28 7 CAATGTATG-(0)-CATACAATT
Shewanella sp ANA-3
Shewana3_2266 SO2282 17 8.1 TATTGTCAT-(1)-GGTACAATT
Shewana3_2266 SO2282 -58 8.1 AATTGTACG-(0)-CATACAATA
Shewana3_2268 PF07690 -75 7.2 AATTGTTAC-(0)-CCTACAATT
Shewana3_2265 PF01810 -104 8.1 AATTGTACC-(1)-ATGACAATA
Shewana3_2265 PF01810 -28 8.1 TATTGTATG-(0)-CGTACAATT
Shewanella sp MR-4
Shewmr4_1753 SO2282 -7 8.1 TATTGTCAT-(1)-GGTACAATT
Shewmr4_1753 SO2282 -81 8.1 AATTGTACG-(0)-CATACAATA
Shewmr4_1751 PF07690 -75 7.2 AATTGTTAC-(0)-CCTACAATT
Shewmr4_1754 PF01810 -103 8.1 AATTGTACC-(1)-ATGACAATA
Shewmr4_1754 PF01810 -28 8.1 TATTGTATG-(0)-CGTACAATT
Shewanella sp MR-7
Shewmr7_1833 SO2282 -7 8.1 TATTGTCAT-(1)-GGTACAATT
Shewmr7_1833 SO2282 -82 8.1 AATTGTACG-(0)-CATACAATA
Shewmr7_1831 PF07690 -75 7.8 AATTGTAAC-(0)-CCTACAATT
Shewmr7_1834 PF01810 -28 8.1 TATTGTATG-(0)-CGTACAATT
Shewmr7_1834 PF01810 -104 8.1 AATTGTACC-(1)-ATGACAATA
Shewanella sp W3-18-1
Sputw3181_1877 SO2282 -97 7 AATTGTATG-(0)-CATACATTG
Sputw3181_1877 SO2282 -22 7.7 TATTGTTAT-(1)-GGTACAATT
Sputw3181_1878 PF01810 -28 7 CAATGTATG-(0)-CATACAATT
Sputw3181_1878 PF01810 -104 7.7 AATTGTACC-(1)-ATAACAATA
Shewanella woodyi ATCC 51908
Swoo_1966 SO2282 -84 7.7 AATTGTACA-(0)-CATACAATA
Swoo_1966 SO2282 -7 7.7 TATTGTTAT-(1)-GGTACAATT
Swoo_1967 PF01810 -55 7.7 TATTGTATG-(0)-TGTACAATT
Swoo_1967 PF01810 -133 7.7 AATTGTACC-(1)-ATAACAATA
Export
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise