Regulon of PflR in Shewanella sediminis HAW-EB3

Properties
Regulator type:	Transcription factor
TF locus tag:	Ssed_1712
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Formate metabolism
Effector:	Formate
Regulog:	PflR - Shewanellaceae
Statistics of regulated genes:
- Genes	5
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 35 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LysR
By effector - Formate
By pathway - Formate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -161 Score: 5.2 Sequence: CATCAATGTACTTGATA Locus tag: Ssed_1710 Name: focA Funciton: Formate efflux transporter (TC 2.A.44 family)
	Ssed_1710	focA	Formate efflux transporter (TC 2.A.44 family)
Position: -61 Score: 5.9 Sequence: TATCAATTTTATTGATA Locus tag: Ssed_1712 Name: pflR Funciton: Predicted transcriptional regulator for formate metabolism, LysR family
	Ssed_1712	pflR	Predicted transcriptional regulator for formate metabolism, LysR family
Position: -275 Score: 5.2 Sequence: ATTCAAGATTATTGATA Locus tag: Ssed_1709 Name: pflX Funciton: hypothetical protein
	Ssed_1709	pflX	hypothetical protein
Position: -536 Score: 5.5 Sequence: TATCAATTTTAATGATA Locus tag: Ssed_1708 Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54) Locus tag: Ssed_1707 Name: pflA Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
	Ssed_1708	pflB	Pyruvate formate-lyase (EC 2.3.1.54)
	Ssed_1707	pflA	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD