Regulon of PflR in Shewanella loihica PV-4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shew_2387
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Formate metabolism
Effector:	Formate
Regulog:	PflR - Shewanellaceae
Statistics of regulated genes:
- Genes	5
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 35 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LysR
By effector - Formate
By pathway - Formate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -210 Score: 5.4 Sequence: TATCAATTTTACTGATT Locus tag: Shew_2388 Name: focA Funciton: Formate efflux transporter (TC 2.A.44 family)
	Shew_2388	focA	Formate efflux transporter (TC 2.A.44 family)
Position: -504 Score: 4.5 Sequence: CATCAAACTTGCTGATA Locus tag: Shew_2390 Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54) Locus tag: Shew_2391 Name: pflA Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
	Shew_2390	pflB	Pyruvate formate-lyase (EC 2.3.1.54)
	Shew_2391	pflA	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -265 Score: 5.4 Sequence: TTTCAAGTTTATTGATA Locus tag: Shew_2389 Name: pflX Funciton: hypothetical protein
	Shew_2389	pflX	hypothetical protein
Position: -59 Score: 5.8 Sequence: CATCAATTTTATTGATA Locus tag: Shew_2387 Name: pflR Funciton: Predicted transcriptional regulator for formate metabolism, LysR family
	Shew_2387	pflR	Predicted transcriptional regulator for formate metabolism, LysR family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD