Regulon of LexA in Saccharopolyspora erythraea NRRL 2338
| Regulator type: | Transcription factor |
| TF locus tag: | SACE_1760, SACE_2836 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Frankineae/Propionibacterineae/Pseudonocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -37
Score: 5.1 Sequence: TCGAACGCGTGTTCAG
Locus tag: SACE_2021
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: SACE_2022
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: SACE_2023
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC
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Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
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ruvA
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Holliday junction DNA helicase RuvA
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -180
Score: 5.1 Sequence: TCGAATGGATGTTCGA
Position: -164
Score: 4.8 Sequence: TCGAACCTGCGTGCGA
Position: -98
Score: 5.6 Sequence: TCGAACAGGTGTTTGA
Locus tag: SACE_1760
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -143
Score: 5.5 Sequence: TCGAACACCCGTTCGT
Locus tag: SACE_1736
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -177
Score: 4.1 Sequence: AGGAACAGGCGGTCGA
Locus tag: SACE_0868
Name: hsdR Funciton: Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) |
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hsdR
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Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |