Profile of regulator LexA in Frankineae/Propionibacterineae/Pseudonocardiaceae
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Frankineae/Propionibacterineae/Pseudonocardiaceae |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Frankia sp. CcI3 | |||||
| Francci3_1369 | ruvC | -40 | 4.5 | TCGAACGAATGTTCTT | |
| Francci3_3510 | lexA | -198 | 5.4 | TCGAACAGACGTTTGA | |
| Francci3_3510 | lexA | -251 | 5.3 | TCGAACGCGTGGTCGA | |
| Francci3_3510 | lexA | -267 | 5 | TCGAACCTTCGTTCGA | |
| Francci3_3525 | recA | -139 | 5.4 | TCGAACGCATGTTCGT | |
| Francci3_0067 | PF02720 | -197 | 5 | CCGAACACATGGTCGA | |
| Francci3_0067 | PF02720 | 28 | 5.6 | TCGAACACATGTTCGG | |
| Francci3_4518 | dnaB | -50 | 5.3 | ACGAACATACGTTCGA | |
| Francci3_3584 | dprA | -268 | 4.1 | CCGAGCGGGCATTCGA | |
| Francci3_0647 | uvrD | -22 | 4.9 | TCGAACGTACGATCGG | |
| Francci3_0194 | hsdR | -233 | 3.7 | GAGAACGGCAGTACGA | |
| Frankia sp. EAN1pec | |||||
| Franean1_5146 | ruvC | -37 | 5.4 | TCGAACGGATGTTCGT | |
| Franean1_1232 | lexA | -298 | 4.9 | TCGAACGCCTGAGCGA | |
| Franean1_1232 | lexA | -244 | 5.4 | TCGAACAGACGTTTGA | |
| Franean1_6708 | recA | -142 | 5.2 | TCGAACGAATGTTCGG | |
| Franean1_1219 | recA | -138 | 5.5 | TCGAACGGATGTTCGG | |
| Franean1_2057 | uvrA | -227 | 5.4 | TCGAACGCGCGTTTGA | |
| Franean1_3452 | PF02720 | -75 | 3.7 | CCGTTCGGGTGTTCTG | |
| Franean1_7308 | dnaB | -137 | 5.8 | TCGAACATATGTTCGA | |
| Franean1_1158 | dprA | -154 | 4.1 | CCGACCGTGCCTTCGA | |
| Franean1_5987 | uvrD | -22 | 5.1 | TCGAACGTACGATCGA | |
| Nakamurella multipartita DSM 44233 | |||||
| Namu_3396 | ruvC | -85 | 4 | CTGGACAGGTGTTCGC | |
| Namu_3979 | lexA | -202 | 5.1 | TCGAACGGACGTTCTA | |
| Namu_3979 | lexA | -186 | 4.4 | TCGAACGTCTGCACGA | |
| Namu_3979 | lexA | -123 | 5.5 | TCGAACGGGTGTTTGA | |
| Namu_3994 | recA | -132 | 5 | TCGAACAGGTGTACGT | |
| Namu_3994 | recA | -284 | 3.9 | TCGATCAGGCGCTGGA | |
| Namu_3157 | PF02720 | -49 | 4 | GTGGACACCCGTTCGG | |
| Namu_5363 | dnaB | -98 | 4.5 | CAGAACACATGTCCGA | |
| Namu_1258 | uvrD | -77 | 5.2 | CCGAACAGGTGATCGA | |
| Acidothermus cellulolyticus 11B | |||||
| Acel_1345 | ruvC | 15 | 5.5 | CCGAACATGCGTTCGA | |
| Acel_1492 | recA | -142 | 5.6 | TCGAACATCTGTTCGG | |
| Acel_1479 | lexA | -106 | 5.1 | TCGAACTGGTGTTTGA | |
| Acel_1479 | lexA | -161 | 5.3 | TCGAACGGGTGTACGA | |
| Acel_1479 | lexA | -177 | 5.9 | TCGAACACGCGTTCGA | |
| Acel_1548 | dprA | -46 | 4.3 | GCGAACACGTGGACGA | |
| Acel_1548 | dprA | -151 | 4.3 | TCGAACGCGCCTTGGA | |
| Acel_0375 | uvrD | 29 | 3.6 | CCGGCCACGTGATCGT | |
| Nocardioides sp. JS614 | |||||
| Noca_2385 | ruvC | -31 | 5.4 | CCGAACACCTGTTCGG | |
| Noca_2341 | recA | -151 | 5.7 | TCGAACAGGTGTTCGG | |
| Noca_3817 | lexA | -47 | 5.6 | TCGAACAGGTGTTTGA | |
| Noca_2524 | uvrA | -42 | 5.6 | ACGAACACCTGTTCGA | |
| Noca_3593 | uvrD | -289 | 4.3 | CCGACAACCTGTTCGA | |
| Propionibacterium acnes KPA171202 | |||||
| PPA1757 | PPA1757 | -83 | 4 | TCGATCGTGGGATCGT | |
| Actinosynnema mirum DSM 43827 | |||||
| Amir_1692 | ruvC | -58 | 5 | TCGAACTGGTGTTCGC | |
| Amir_1434 | lexA | -184 | 5.6 | TCGAACAACCGTTCGA | |
| Amir_1434 | lexA | -168 | 5.3 | TCGAACGCCCGTGCGA | |
| Amir_1434 | lexA | -103 | 5.6 | TCGAACAGGTGTTTGA | |
| Amir_3974 | lexA | -157 | 3.8 | ACGACCTCGTGCTCGA | |
| Amir_1419 | recA | -151 | 5.7 | TCGAACACCTGTTCGG | |
| Amir_1419 | recA | -264 | 4.2 | CCGACCAGGCGTTGGA | |
| Amir_5483 | uvrA | -38 | 5.6 | TCGAACATGTGTTCGG | |
| Amir_5585 | dprA | -26 | 5.8 | TCGAACAGACGTTCGA | |
| Amir_5585 | dprA | -87 | 4.2 | TCGACCACCCGGTCGT | |
| Amir_2280 | gyrB | -100 | 5.5 | TCGAACGCGTGTTTGA | |
| Amir_0958 | hsdR | 16 | 4.1 | ACGAATCCGCGTTCGG | |
| Saccharomonospora viridis DSM 43017 | |||||
| Svir_15060 | ruvC | -33 | 5 | TCGAACTGGTGTTCGC | |
| Svir_27590 | lexA | -102 | 5.1 | TCGAACAAACGTTTGA | |
| Svir_27590 | lexA | -165 | 5.4 | TCGAACACCCGTGCGA | |
| Svir_27820 | recA | -168 | 5.7 | TCGAACAGGTGTTCGG | |
| Svir_39470 | dnaB | -44 | 5.9 | TCGAACAGGCGTTCGA | |
| Svir_08220 | gyrB | -24 | 4.6 | TCGAACAGTTGACCGA | |
| Saccharopolyspora erythraea NRRL 2338 | |||||
| SACE_2021 | ruvC | -37 | 5.1 | TCGAACGCGTGTTCAG | |
| SACE_1760 | lexA | -98 | 5.6 | TCGAACAGGTGTTTGA | |
| SACE_1760 | lexA | -164 | 4.8 | TCGAACCTGCGTGCGA | |
| SACE_1760 | lexA | -180 | 5.1 | TCGAATGGATGTTCGA | |
| SACE_1736 | recA | -143 | 5.5 | TCGAACACCCGTTCGT | |
| SACE_0868 | hsdR | -177 | 4.1 | AGGAACAGGCGGTCGA | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |