Regulon of LexA in Saccharomonospora viridis DSM 43017

Properties
Regulator type:	Transcription factor
TF locus tag:	Svir_27590
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Frankineae/Propionibacterineae/Pseudonocardiaceae
Statistics of regulated genes:
- Genes	9
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 68 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -24 Score: 4.6 Sequence: TCGAACAGTTGACCGA Locus tag: Svir_08220 Name: gyrB Funciton: Topoisomerase IV, subunit B (EC 5.99.1.-) Locus tag: Svir_08230 Name: gyrA Funciton: Topoisomerase IV, subunit A (EC 5.99.1.-)
	Svir_08220	gyrB	Topoisomerase IV, subunit B (EC 5.99.1.-)
	Svir_08230	gyrA	Topoisomerase IV, subunit A (EC 5.99.1.-)
Position: -165 Score: 5.4 Sequence: TCGAACACCCGTGCGA Position: -102 Score: 5.1 Sequence: TCGAACAAACGTTTGA Locus tag: Svir_27590 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	Svir_27590	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -168 Score: 5.7 Sequence: TCGAACAGGTGTTCGG Locus tag: Svir_27820 Name: recA Funciton: Recombinase A Locus tag: Svir_27810 Name: recX Funciton: Regulatory protein RecX
	Svir_27820	recA	Recombinase A
	Svir_27810	recX	Regulatory protein RecX
Position: -33 Score: 5 Sequence: TCGAACTGGTGTTCGC Locus tag: Svir_15060 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Locus tag: Svir_15070 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: Svir_15080 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	Svir_15060	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	Svir_15070	ruvA	Holliday junction DNA helicase RuvA
	Svir_15080	ruvB	Holliday junction DNA helicase RuvB
Position: -44 Score: 5.9 Sequence: TCGAACAGGCGTTCGA Locus tag: Svir_39470 Name: dnaB Funciton: Replicative DNA helicase (EC 3.6.1.-)
	Svir_39470	dnaB	Replicative DNA helicase (EC 3.6.1.-)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD