Regulon of LexA in Frankia sp. CcI3

Properties
Regulator type:	Transcription factor
TF locus tag:	Francci3_3510
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Frankineae/Propionibacterineae/Pseudonocardiaceae
Statistics of regulated genes:
- Genes	12
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 68 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -267 Score: 5 Sequence: TCGAACCTTCGTTCGA Position: -251 Score: 5.3 Sequence: TCGAACGCGTGGTCGA Position: -198 Score: 5.4 Sequence: TCGAACAGACGTTTGA Locus tag: Francci3_3510 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	Francci3_3510	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -22 Score: 4.9 Sequence: TCGAACGTACGATCGG Locus tag: Francci3_0647 Name: uvrD Funciton: ATP-dependent DNA helicase II
	Francci3_0647	uvrD	ATP-dependent DNA helicase II
Position: -197 Score: 5 Sequence: CCGAACACATGGTCGA Position: 28 Score: 5.6 Sequence: TCGAACACATGTTCGG Locus tag: Francci3_0067 Name: PF02720 Funciton: HNH endonuclease
	Francci3_0067	PF02720	HNH endonuclease
Position: -268 Score: 4.1 Sequence: CCGAGCGGGCATTCGA Locus tag: Francci3_3584 Name: dprA Funciton: DNA protecting protein DprA Locus tag: Francci3_3583 Name: xerC Funciton: Site-specific DNA-tyrosine recombinase, XerC
	Francci3_3584	dprA	DNA protecting protein DprA
	Francci3_3583	xerC	Site-specific DNA-tyrosine recombinase, XerC
Position: -139 Score: 5.4 Sequence: TCGAACGCATGTTCGT Locus tag: Francci3_3525 Name: recA Funciton: Recombinase A Locus tag: Francci3_3524 Name: recX Funciton: Regulatory protein RecX
	Francci3_3525	recA	Recombinase A
	Francci3_3524	recX	Regulatory protein RecX
Position: -50 Score: 5.3 Sequence: ACGAACATACGTTCGA Locus tag: Francci3_4518 Name: dnaB Funciton: Replicative DNA helicase (EC 3.6.1.-)
	Francci3_4518	dnaB	Replicative DNA helicase (EC 3.6.1.-)
Position: -233 Score: 3.7 Sequence: GAGAACGGCAGTACGA Locus tag: Francci3_0194 Name: hsdR Funciton: Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
	Francci3_0194	hsdR	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
Position: -40 Score: 4.5 Sequence: TCGAACGAATGTTCTT Locus tag: Francci3_1369 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Locus tag: Francci3_1370 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: Francci3_1371 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	Francci3_1369	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	Francci3_1370	ruvA	Holliday junction DNA helicase RuvA
	Francci3_1371	ruvB	Holliday junction DNA helicase RuvB

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Frankia sp. CcI3

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --