Regulon of LexA in Listeria monocytogenes EGD-e
| Regulator type: | Transcription factor |
| TF locus tag: | lmo1302 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Listeriaceae |
| Statistics of regulated genes: | |
| - Genes | 25 |
| - Operons | 12 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Listeriaceae
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -41
Score: 5.9 Sequence: TAATAAGAACGTATATTCGGTTTT
Locus tag: lmo2222
Name: yhaO Funciton: Predicted DNA double-strand break repair protein
Locus tag: lmo2221
Name: yhaN Funciton: Putative DNA double-strand break repair ATPase
Locus tag: lmo2220
Name: yhaM Funciton: Predicted 3'-5' exoribonuclease |
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yhaO
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Predicted DNA double-strand break repair protein
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yhaN
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Putative DNA double-strand break repair ATPase
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yhaM
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Predicted 3'-5' exoribonuclease
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Position: -57
Score: 4.3 Sequence: TGTTGCGAACGTAGGTTCTGTGTT
Locus tag: lmo0157
Name: srmB Funciton: DinG family ATP-dependent helicase CPE1197
Locus tag: lmo0158
Name: yxeH Funciton: Cof-like hydrolase |
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srmB
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DinG family ATP-dependent helicase CPE1197
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yxeH
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Cof-like hydrolase
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Position: -47
Score: 4.9 Sequence: AAAACAGAACATATGTTTTATCAT
Locus tag: lmo1640
Name: lin1681 Funciton: Conserved hypothetical protein
Locus tag: lmo1639
Name: tag Funciton: DNA-3-methyladenine glycosylase (EC 3.2.2.20)
Locus tag: lmo1638
Name: lin1679 Funciton: Putative carboxypeptidase |
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lin1681
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Conserved hypothetical protein
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tag
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DNA-3-methyladenine glycosylase (EC 3.2.2.20)
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lin1679
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Putative carboxypeptidase
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Position: -72
Score: 5.6 Sequence: TAATAAGAACATTTGTTCGTATAA
Locus tag: lmo2675
Name: lmo2675 Funciton: Conserved hypothetical protein
Locus tag: lmo2676
Name: uvrX Funciton: Predicted UV-damage repair protein UvrX |
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lmo2675
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Conserved hypothetical protein
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uvrX
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Predicted UV-damage repair protein UvrX
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Position: -165
Score: 6.3 Sequence: AAATGCGAAAATATGTTCGGTTTT
Locus tag: lmo2489
Name: uvrB Funciton: Excinuclease ABC, subunit B
Locus tag: lmo2488
Name: uvrA Funciton: Excinuclease ABC, subunit A |
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uvrB
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Excinuclease ABC, subunit B
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uvrA
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Excinuclease ABC, subunit A
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Position: -142
Score: 6.3 Sequence: AAATACGAATAAATGTTCGCTTTT
Locus tag: lmo1398
Name: recA Funciton: DNA recombinase A |
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recA
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DNA recombinase A
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Position: -144
Score: 5.9 Sequence: CAAAAAGAATGTATGTTCGCTTTT
Position: -84
Score: 5.6 Sequence: AAAAACGAACCTTTGTTTGCATAT
Locus tag: lmo1302
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
Locus tag: lmo1301
Name: guaA Funciton: Probable GMP synthase |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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guaA
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Probable GMP synthase
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Position: -30
Score: 5.8 Sequence: AAATAAAAACATATGTTCGGTGGT
Locus tag: lmo2268
Name: addB Funciton: ATP-dependent nuclease, subunit B
Locus tag: lmo2267
Name: addA Funciton: ATP-dependent nuclease, subunit A
Locus tag: lmo2266
Name: yisK Funciton: Conserved hypothetical protein
Locus tag: lmo2265
Name: PF07457 Funciton: Conserved hypothetical protein |
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addB
|
ATP-dependent nuclease, subunit B
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addA
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ATP-dependent nuclease, subunit A
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yisK
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Conserved hypothetical protein
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PF07457
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Conserved hypothetical protein
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Position: -33
Score: 4.6 Sequence: AAAAAAGAACGTATGTGCGAAAGG
Locus tag: lmo2332
Name: int Funciton: Integrase |
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int
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Integrase
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Position: -38
Score: 5.6 Sequence: GAATAAGAACGCTTGTTCGTTTTG
Locus tag: lmo1975
Name: dinP Funciton: DNA polymerase IV (EC 2.7.7.7) |
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dinP
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DNA polymerase IV (EC 2.7.7.7)
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Position: -44
Score: 5.8 Sequence: AAATAAGAACAAATGTTTGTATGG
Locus tag: lmo1759
Name: pcrA Funciton: ATP-dependent DNA helicase UvrD/PcrA
Locus tag: lmo1758
Name: ligA Funciton: DNA ligase (EC 6.5.1.2)
Locus tag: lmo1757
Name: yerH Funciton: Putative lipoprotein |
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pcrA
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ATP-dependent DNA helicase UvrD/PcrA
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ligA
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DNA ligase (EC 6.5.1.2)
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yerH
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Putative lipoprotein
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Position: -75
Score: 5.8 Sequence: AAACACGAACACACTTTCTTTTTT
Locus tag: lmo1574
Name: dnaE Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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dnaE
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |