Regulon of HrcA in Actinosynnema mirum DSM 43827
| Regulator type: | Transcription factor |
| TF locus tag: | Amir_1241 |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | HrcA - Frankineae/Propionibacterineae/Pseudonocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - HrcA
- By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -213
Score: 6.8 Sequence: CTTGCACTCTCGGGTGGCGAGTGCTAA
Position: -178
Score: 6.9 Sequence: CTGGCACTCGGCACTGCTGAGTGCCAG
Locus tag: Amir_0442
Name: groL2 Funciton: Heat shock protein 60 family chaperone GroEL |
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groL2
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Heat shock protein 60 family chaperone GroEL
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Position: -50
Score: 6.4 Sequence: TTGGCACTCGTGACGTGGGAGTGCCAA
Locus tag: Amir_0626
Name: COG2331 Funciton: Conserved hypothetical protein |
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COG2331
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Conserved hypothetical protein
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Position: -128
Score: 6.7 Sequence: TTGGCACTCGAATGGGTAGAGTGCTAG
Locus tag: Amir_6544
Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: Amir_6543
Name: groL Funciton: Heat shock protein 60 family chaperone GroEL |
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groS
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Heat shock protein 60 family co-chaperone GroES
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groL
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Heat shock protein 60 family chaperone GroEL
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |