Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HrcA in Nakamurella multipartita DSM 44233

Properties
Regulator type: Transcription factor
TF locus tag: Namu_1571
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Regulog: HrcA - Frankineae/Propionibacterineae/Pseudonocardiaceae
Statistics of regulated genes:
- Genes 8
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 47 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -226
Score: 6.8
Sequence: CTTGCACTCTCCGCGGTCGAGTGCTAA
Position: -192
Score: 6.3
Sequence: TTGGCACTCGGAACCAACGAGTGCCAG
Locus tag: Namu_4827
Name: groL2
Funciton: Heat shock protein 60 family chaperone GroEL
groL2
Heat shock protein 60 family chaperone GroEL

Position: -57
Score: 6.1
Sequence: TTGGCAGCCGGAGCGGGCGAGTGCCAA
Locus tag: Namu_1571
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Namu_1572
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: Namu_1573
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA
Heat shock response transcriptional regulator HrcA, HrcA family
dnaJ
Chaperone protein DnaJ
rsmE
16S ribosomal RNA methyltransferase

Position: -61
Score: 6.4
Sequence: CTGGCACTGGGCACTGTCGAGTGCCAA
Locus tag: Namu_4645
Name: COG2331
Funciton: Conserved hypothetical protein
COG2331
Conserved hypothetical protein

Position: -98
Score: 6.8
Sequence: TTGGCACTCTCGGTCGTCGAGTGCTAA
Locus tag: Namu_0179
Name: hsp18
Funciton: Small heat shock protein 18
hsp18
Small heat shock protein 18

Position: -156
Score: 6.5
Sequence: CTGGCACTCCCATGGCTAGAGTGCTAG
Locus tag: Namu_1207
Name: groS
Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: Namu_1208
Name: groL
Funciton: Heat shock protein 60 family chaperone GroEL
groS
Heat shock protein 60 family co-chaperone GroES
groL
Heat shock protein 60 family chaperone GroEL
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
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