Regulon of HrcA in Nakamurella multipartita DSM 44233
| Regulator type: | Transcription factor |
| TF locus tag: | Namu_1571 |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | HrcA - Frankineae/Propionibacterineae/Pseudonocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - HrcA
- By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -226
Score: 6.8 Sequence: CTTGCACTCTCCGCGGTCGAGTGCTAA
Position: -192
Score: 6.3 Sequence: TTGGCACTCGGAACCAACGAGTGCCAG
Locus tag: Namu_4827
Name: groL2 Funciton: Heat shock protein 60 family chaperone GroEL |
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groL2
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Heat shock protein 60 family chaperone GroEL
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Position: -57
Score: 6.1 Sequence: TTGGCAGCCGGAGCGGGCGAGTGCCAA
Locus tag: Namu_1571
Name: hrcA Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Namu_1572
Name: dnaJ Funciton: Chaperone protein DnaJ
Locus tag: Namu_1573
Name: rsmE Funciton: 16S ribosomal RNA methyltransferase |
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hrcA
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Heat shock response transcriptional regulator HrcA, HrcA family
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dnaJ
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Chaperone protein DnaJ
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rsmE
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16S ribosomal RNA methyltransferase
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Position: -61
Score: 6.4 Sequence: CTGGCACTGGGCACTGTCGAGTGCCAA
Locus tag: Namu_4645
Name: COG2331 Funciton: Conserved hypothetical protein |
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COG2331
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Conserved hypothetical protein
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Position: -98
Score: 6.8 Sequence: TTGGCACTCTCGGTCGTCGAGTGCTAA
Locus tag: Namu_0179
Name: hsp18 Funciton: Small heat shock protein 18 |
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hsp18
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Small heat shock protein 18
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Position: -156
Score: 6.5 Sequence: CTGGCACTCCCATGGCTAGAGTGCTAG
Locus tag: Namu_1207
Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: Namu_1208
Name: groL Funciton: Heat shock protein 60 family chaperone GroEL |
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groS
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Heat shock protein 60 family co-chaperone GroES
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groL
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Heat shock protein 60 family chaperone GroEL
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |