Regulon of HrcA in Nakamurella multipartita DSM 44233

Properties
Regulator type:	Transcription factor
TF locus tag:	Namu_1571
Regulator family:	HrcA
Regulation mode:	repressor
Biological process:	Heat shock response
Effector:	Heat shock
Regulog:	HrcA - Frankineae/Propionibacterineae/Pseudonocardiaceae
Statistics of regulated genes:
- Genes	8
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 47 sites [see more]

Member of regulog collections

By trascription factor - HrcA
By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
By TF family - HrcA
By effector - Heat shock
By pathway - Heat shock response

Regulated operons
	Locus Tag	Name	Function
Position: -226 Score: 6.8 Sequence: CTTGCACTCTCCGCGGTCGAGTGCTAA Position: -192 Score: 6.3 Sequence: TTGGCACTCGGAACCAACGAGTGCCAG Locus tag: Namu_4827 Name: groL2 Funciton: Heat shock protein 60 family chaperone GroEL
	Namu_4827	groL2	Heat shock protein 60 family chaperone GroEL
Position: -57 Score: 6.1 Sequence: TTGGCAGCCGGAGCGGGCGAGTGCCAA Locus tag: Namu_1571 Name: hrcA Funciton: Heat shock response transcriptional regulator HrcA, HrcA family Locus tag: Namu_1572 Name: dnaJ Funciton: Chaperone protein DnaJ Locus tag: Namu_1573 Name: rsmE Funciton: 16S ribosomal RNA methyltransferase
	Namu_1571	hrcA	Heat shock response transcriptional regulator HrcA, HrcA family
	Namu_1572	dnaJ	Chaperone protein DnaJ
	Namu_1573	rsmE	16S ribosomal RNA methyltransferase
Position: -61 Score: 6.4 Sequence: CTGGCACTGGGCACTGTCGAGTGCCAA Locus tag: Namu_4645 Name: COG2331 Funciton: Conserved hypothetical protein
	Namu_4645	COG2331	Conserved hypothetical protein
Position: -98 Score: 6.8 Sequence: TTGGCACTCTCGGTCGTCGAGTGCTAA Locus tag: Namu_0179 Name: hsp18 Funciton: Small heat shock protein 18
	Namu_0179	hsp18	Small heat shock protein 18
Position: -156 Score: 6.5 Sequence: CTGGCACTCCCATGGCTAGAGTGCTAG Locus tag: Namu_1207 Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES Locus tag: Namu_1208 Name: groL Funciton: Heat shock protein 60 family chaperone GroEL
	Namu_1207	groS	Heat shock protein 60 family co-chaperone GroES
	Namu_1208	groL	Heat shock protein 60 family chaperone GroEL

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD