Regulon of HrcA in Frankia sp. CcI3
| Regulator type: | Transcription factor |
| TF locus tag: | Francci3_1264 |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | HrcA - Frankineae/Propionibacterineae/Pseudonocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - HrcA
- By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -108
Score: 7 Sequence: TTGGCACTCGGCACGTGAGAGTGCCAG
Locus tag: Francci3_0632
Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: Francci3_0633
Name: groL Funciton: Heat shock protein 60 family chaperone GroEL |
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groS
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Heat shock protein 60 family co-chaperone GroES
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groL
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Heat shock protein 60 family chaperone GroEL
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Position: -95
Score: 6.8 Sequence: TTGGCACTCACTGCGGCCGAGTGCCAA
Locus tag: Francci3_1264
Name: hrcA Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Francci3_1265
Name: dnaJ Funciton: Chaperone protein DnaJ
Locus tag: Francci3_1266
Name: rsmE Funciton: 16S ribosomal RNA methyltransferase |
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hrcA
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Heat shock response transcriptional regulator HrcA, HrcA family
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dnaJ
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Chaperone protein DnaJ
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rsmE
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16S ribosomal RNA methyltransferase
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Position: -42
Score: 6.5 Sequence: TTGGCAGTCTCCACGTCAGAGTGCCAA
Locus tag: Francci3_4042
Name: COG2331 Funciton: Conserved hypothetical protein |
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COG2331
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Conserved hypothetical protein
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Position: -202
Score: 6.7 Sequence: CTTGCACTCACCCAGGCCGAGTGCTAA
Position: -168
Score: 6.7 Sequence: CTGGCACTCTCGCCTAGGGAGTGCCAA
Locus tag: Francci3_4398
Name: groL2 Funciton: Heat shock protein 60 family chaperone GroEL |
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groL2
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Heat shock protein 60 family chaperone GroEL
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |